Microarray profiles from tubulointerstitial compartment of kidney biopsies from adults screened for enrollment in the NEPTUNE cohort
Expression microarray · human · 193 samples
- What it is
- Expression microarrayGene activity read on a chip (the older technology that RNA-seq replaced).
- Organism
- Homo sapiens (human)
- Samples
- 193 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE200818_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: For arrays the series matrix is normally the normalised expression table you want; the raw array files (CEL and similar) are in the RAW.tar.
Also filed as BioProject PRJNA826866. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 193 more — browse all 193 samples with per-sample file links →
- GSE183795 Microarray gene-expression profiles of 139 pancreatic tumor,102 adjacent non-tumor tissue from patients with pancreatic ductal adenocarcinoma and 3 normal pancreas from donors. 244 samples shares microarray, profiles
- GSE62452 Microarray gene-expression profiles of 69 pancreatic tumors and 61 adjacent non-tumor tissue from patients with pancreatic ductal adenocarcinoma 130 samples shares microarray, profiles
- GSE28735 Microarray gene-expression profiles of 45 matching pairs of pancreatic tumor and adjacent non-tumor tissues from 45 patients with pancreatic ductal adenocarcinoma 90 samples shares microarray, profiles
- GSE148070 Microarray expression data from follicular lymphoma patients' lymph node biopsies (frozen) 40 samples shares microarray, biopsies
- GSE93646 Microarray-based DNA methylation profiles of primary medulloblastomas 428 samples shares microarray, profiles
- GSE117518 Microarray analysis of long noncoding RNA and mRNA expression profiles in Randall’s Plaques of CaOx stones patients 6 samples shares microarray, profiles
- GSE100833 A functional genomics predictive network model identifies regulators of inflammatory bowel disease: Microarray Analysis of Human Blood and Intestinal Biopsy Samples from a Phase 2b, Double-blind, Placebo-controlled Study of Ustekinumab in Crohn's Disease 1717 samples shares microarray
- GSE49710 RNA-Seq reveals an unprecedented complexity of the neuroblastoma transcriptome and is suitable for clinical endpoint prediction [microarray] 498 samples shares microarray
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.