GEO series
DNA methylation insulates exons from CTCF loops with nuclear speckles (ChiP-Seq)
GSE217752
Homo sapiens
Genome binding/occupancy profiling by high throughput sequencing
39 samples
2024/11/11
GPL24676
Summary
CTCF is necessary for the formation and maintenance of many DNA loops and Topologically Associating Domains, but the genomic features that influence CTCF looping are incompletely understood. We characterized the downstream effects of treating cells with a DNMT1 inhibitor and acute depletion of nuclear speckles to study the factors that influence CTCF looping.
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Paper (PMID 40900123) ↗
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