ETMR stem-like state and chemo-resistance are supported by perivascular cells at single-cell resolution (human+murine organoids subset)
Single-cell RNA-seq · human · 21 samples
- What it is
- Single-cell RNA-seqGene activity measured in thousands of individual cells, so cell types can be told apart.
- Organism
- Homo sapiens (human)
- Samples
- 21 samples
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
- Paper
- ETMR stem-like state and chemo-resistance are supported by perivascular cells at single-cell resolutionNature communications · 2025
Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE224475_RAW.tar (it can run to tens of gigabytes).
Raw sequencing reads
The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.
What the files usually look like: Single-cell studies usually ship their counts as 10x files (matrix.mtx, barcodes.tsv, features.tsv), an .h5 file, or an .rds / .h5ad object that Seurat or Scanpy can open. Look for those among the supplementary files.
Also filed as BioProject PRJNA934565 and SRA study SRP424153. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 21 more — browse all 21 samples with per-sample file links →
- GSE224478 ETMR stem-like state and chemo-resistance are supported by perivascular cells at single-cell resolution 51 samples shares etmr, chemo-resistance, perivascular, single-cell, resolution, stem-like, supported
- GSE281902 Periosteum Signatures of Delayed Fracture Healing in Type 2 Diabetes at Single-Cell Resolution 5 samples shares single-cell, resolution
- GSE262580 High-resolution, noninvasive single-cell lineage tracing in mice and humans based on DNA methylation epimutations 697 samples shares single-cell, resolution
- GSE300551 Massively multiplex multi-modal chemical screens at single-cell resolution with icCITE-plex 25 samples shares single-cell, resolution
- GSE150672 Highly Efficient, Massively-Parallel Single-Cell RNA-Seq Reveals Cellular States and Molecular Features of Human Skin Pathology 438 samples shares single-cell
- GSE246613 Single-cell and spatial profiling identify three response trajectories to pembrolizumab and radiation therapy in triple negative breast cancer 266 samples shares single-cell
- GSE38495 Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells 121 samples shares single-cell
- GSE92872 Pooled CRISPR screening with single-cell transcriptome read-out 100 samples shares single-cell
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.