Profiling cancer cells during early metastasis identifies targetable subpopulations [cell line scRNA-seq]

Direct links to NCBI, no account and no request form: the whole study as GSE225331_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 1238 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA935281 and SRA study SRP422702. Searching any of these in the dataset finder brings you back here.

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+ 1238 more — browse all 1238 samples with per-sample file links →

• GSE337246 Integrated single-cell profiling of RNA and DNA interactomes reveals targetable chromatin architectures in cancer [scRNA-Seq organoids] 35 samples
• GSE324131 A single-cell and spatial atlas of prostate cancer reveals the combinatorial nature of gene modules underlying lineage plasticity and metastasis 38 samples
• GSE294300 Single-cell gene expression profiles of cells from primary colorectal cancer and adjacent normal tissue [scRNA-Seq] 36 samples
• GSE319641 RNA-Seq profiling of pre- and on-treatment tumor samples from breast cancer patients enrolled in the NeoTRIP trial. 401 samples
• GSE309595 Longitudinal Analysis of Multiple Myeloma: Therapeutic Response and Immune Microenvironment Dynamics in the Context of Tumor Heterogeneity [scRNA-seq] 270 samples
• GSE243013 A single-cell atlas of immune heterogeneity in anti-PD1-treated non-small cell lung cancer 243 samples
• GSE263733 Single-cell transcriptome analysis reveals subtype-specific clonal evolution and microenvironmental changes in liver metastasis of pancreatic adenocarcinoma and their clinical implications 218 samples
• GSE323973 Expression profiling by high throughput sequencing of breast cancer 158 samples

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