← BioTransfer GEO Dataset Finder
GEO series

A novel subtype of astrocytes critical for HIV-associated pain pathogenesis

GSE228974 Mus musculus Expression profiling by high throughput sequencing 4 samples Submitted 2025/10/27 Platform GPL24247
Summary
Pathological pain is a frequent complication in HIV patients, yet the underlying mechanism remains elusive, and effective therapeutic targets have not been identified. Reactive astrocytes are specifically activated in the spinal dorsal horn (SDH) of HIV patients with pathological pain and required for HIV-associated pain development in mouse models. These findings suggest that reactive astrocytes play a crucial role in the pathogenesis of HIV-associated pain. However, due to the heterogeneity of reactive astrocytes, the pathogenic subtype remains unknown. In this study, we used single-nucleus RNA-seq (snRNA-seq) transcriptomic analysis to identify a novel subtype of HIV-pain-associated astrocytes (HIPAs) in the lumbar spinal cord of HIV-1 gp120 transgenic models and in the spinal cord of HIV patients. HIPAs express galectin 3 (Gal3) and exhibit transcriptomic signatures of phagocytosis and inflammation. We demonstrated that HIPAs phagocytose neuronal components and are associated with neuronal degeneration. We also found that knockout (KO) of Gal3 in gp120 transgenic mice reduced the number of HIPAs. Furthermore, Gal3 KO inhibited the expression of mechanical allodynia and HIV pain-related pathogenic processes, including neuronal degeneration and neuroinflammation, in gp120 transgenic mice. Our data collectively suggest that HIPAs are a novel Gal3-expressing astrocytic subtype that plays a critical role in gp120-induced pathogenesis in the spinal pain neural circuit. Targeting HIPAs may provide a potential therapeutic strategy for treating HIV-associated pain.
Published in
Identification of a reactive astrocyte subpopulation during HIV-associated pain pathogenesis in mouse models
Zheng J, Spurgat M, Maurelli M et al. · Nature communications 2025 · PMID 41387458 · doi:10.1038/s41467-025-67368-2
This dataset
Download

Direct links to NCBI, no account and no request form: the whole study as GSE228974_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 4 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA952261 and SRA study SRP430893. Searching any of these in the dataset finder brings you back here.

Samples in this study

The sample list for this study is not cached yet. Press Sort into groups and it will be fetched from NCBI.

+ 4 more — browse all 4 samples with per-sample file links →

Similar datasets

Search all mouse RNA-seq datasets in GEO →

Share this dataset

Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.