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Epigenetic regulation of CD8+ effector T cell differentiation by PDCD5

GSE231510 Mus musculus Expression profiling by high throughput sequencing 4 samples Submitted 2025/03/25 Platform GPL24247
Summary
Epigenetic modification is critical in the establishment of the transcriptional program for CD8+ effector T cell differentiation. How this is regulated at an early stage before the expression of master transcription factors remains elusive. Here, we identify PDCD5 as an activation-induced molecule that is required for proper differentiation and expansion of antigen-specific CD8+ effector T cells in a chronic viral infection mouse model. Genetic deletion of Pdcd5 diminished effector T cell formation and function, leaving T cell activation, metabolic reprogramming, and memory/exhausted T cell differentiation largely unaffected. At the molecular level, reduced chromatin accessibility and transcription of Tbx21 and its regulated genes were found in Pdcd5-/- CD8+ T cells. We further identify PRDM9 that facilitates the H3K4me3 modification of effector signature genes in CD8+ T cells. The interaction of PDCD5 with PRDM9 promoted the translocation and lysine methyltransferase activity of PRDM9. These data indicate a pivotal role of PDCD5/PRDM9 axis in epigenetic reprogramming at the early stage of effector CD8+ T cell fate determination.
Published in
Epigenetic Regulation of CD8(+) Effector T Cell Differentiation by PDCD5
Jin L, Zhang X, Wang J et al. · European journal of immunology 2025 · PMID 40111008 · doi:10.1002/eji.202451388
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Also filed as BioProject PRJNA966175 and SRA study SRP435596. Searching any of these in the dataset finder brings you back here.

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