Moderate Endurance Exercise increases Arrhythmia Susceptibility and modulates Cardiac Structure and Function in a Sex Dimorphic manner.
RNA-seq (gene expression) · mouse · 12 samples
- What it is
- RNA-seq (gene expression)Gene activity measured by sequencing. The summary does not mention single-cell work, so this is most likely bulk: one average per sample, the usual starting point for comparing groups.
- Organism
- Mus musculus (mouse)
- Samples
- 12 samples: 3 × FEX vs 3 × FSE vs 3 × MEX vs 3 × MSEGroups are read from the sample names, not from the paper. Check the list below.
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
- Paper
- Moderate Endurance Exercise Increases Arrhythmia Susceptibility and Modulates Cardiac Structure and Function in a Sexually Dimorphic MannerJournal of the American Heart Association · 2024
Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE233004_RAW.tar (it can run to tens of gigabytes).
Raw sequencing reads
The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.
What the files usually look like: For RNA-seq the counts are usually a table among the supplementary files (look for 'counts', 'expression', 'FPKM' or 'TPM' in the file name). The series matrix of a sequencing study is sometimes nearly empty.
Also filed as BioProject PRJNA974703 and SRA study SRP438775. Searching any of these in the dataset finder brings you back here.
Supports a between-group comparison across 12 samples.
How we read this: 4 replicated groups read from 12 sample titles; they account for 12 of them. These groups are guessed from the sample names, not taken from the paper, so check them against the sample list below before relying on them.
- GSM7400614 FEX360 FEX
- GSM7400615 FEX361 FEX
- GSM7400616 FEX362 FEX
- GSM7400617 FSE366 FSE
- GSM7400618 FSE367 FSE
- GSM7400619 FSE368 FSE
- GSM7400620 MEX363 MEX
- GSM7400621 MEX364 MEX
- GSM7400622 MEX365 MEX
- GSM7400623 MSE369 MSE
- GSM7400624 MSE370 MSE
- GSM7400625 MSE371 MSE
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- GSE280781 Preterm birth increases susceptibility to hyperglycemia-induced glomerular alterations in the kidneys of male mice [bulk RNA-seq] 20 samples shares susceptibility, increases
- GSE319377 Preterm Birth Increases Susceptibility to Hyperglycemia-Induced Kidney Injury with Sex-Specific Differences in Structural and Molecular Responses 14 samples shares susceptibility, increases
- GSE286031 Hepatic acetyl-CoA metabolism modulates neuroinflammation and depression susceptibility via acetate 12 samples shares susceptibility, modulates
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- GSE273079 Castration Increases Aggressiveness of Prostatic Luminal Progenitor Cells in Prostate Cancer Through FosL1/AP-1-Mediated Transcriptional Reprogramming 384 samples shares increases
- GSE225317 Trophectoderm biopsies of blastocysts for preimplantation genetic testing following in vitro fertilization and embryo culture increases epigenetic dysregulation in a mouse model [RNA-seq] 110 samples shares increases
- GSE330309 Impact of Sex Chromosomes and Gonad Type in Stress Susceptibility in Corticostriatal Brain Regions 96 samples shares susceptibility
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.