Tracking of donor and recipient immune and leukemia phenotypes after allogeneic stem cell transplantation using mitochondrial DNA mutations. [ASAP-Seq 3]
human · 14 samples
- Organism
- Homo sapiens (human)
- Samples
- 14 samples: 14 samples, each with a distinct title — no replicated groupsGroups are read from the sample names, not from the paper. Check the list below.
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI.
- Paper
- Tracking Rare Single Donor and Recipient Immune and Leukemia Cells after Allogeneic Hematopoietic Cell Transplantation Using Mitochondrial DNA MutationsBlood cancer discovery · 2024
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE234555_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
Also filed as BioProject PRJNA982044. Searching any of these in the dataset finder brings you back here.
Any grouping that defines a comparison lives in the sample characteristics, which GEO records separately from the titles.
How we read this: Read from 14 sample titles: 14 distinct titles with little repetition. These groups are guessed from the sample names, not taken from the paper, so check them against the sample list below before relying on them.
- GSM7470688 AML1010.1 scATAC-seq
- GSM7470689 AML1010.1 TSB
- GSM7470690 AML1010.23 scATAC-seq
- GSM7470691 AML1010.23 TSA/TSB
- GSM7470692 AML1010.45 scATAC-seq
- GSM7470693 AML1010.45 TSA/TSB
- GSM7470694 AML1012.12 scATAC-seq
- GSM7470695 AML1012.12 TSA/TSB
- GSM7470696 AML1012.34 scATAC-seq
- GSM7470697 AML1012.34 TSA/TSB
- GSM7470698 AML1026.12 scATAC-seq
- GSM7470699 AML1026.12 TSA/TSB
- GSM7470700 AML1026.34 scATAC-seq
- GSM7470701 AML1026.34 TSA/TSB
- GSE234552 Tracking of donor and recipient immune and leukemia phenotypes after allogeneic stem cell transplantation using mitochondrial DNA mutations. [ASAP-Seq 2] 30 samples shares transplantation, mitochondrial, phenotypes, allogeneic, recipient, mutations, tracking, leukemia
- GSE234556 Tracking of donor and recipient immune and leukemia phenotypes after allogeneic stem cell transplantation using mitochondrial DNA mutations. [Tapestri] 10 samples shares transplantation, mitochondrial, phenotypes, allogeneic, recipient, mutations, tracking, leukemia
- GSE234551 Tracking of donor and recipient immune and leukemia phenotypes after allogeneic stem cell transplantation using mitochondrial DNA mutations. [ASAP-Seq 1] 9 samples shares transplantation, mitochondrial, phenotypes, allogeneic, recipient, mutations, tracking, leukemia
- GSE234558 Tracking rare single donor and recipient immune and leukemia cells after allogeneic hematopoietic cell transplantation using mitochondrial DNA mutations 85 samples shares transplantation, mitochondrial, allogeneic, recipient, mutations, tracking, leukemia
- GSE287297 Fusion oncoproteins and cooperating mutations define disease phenotypes in NUP98-rearranged leukemia [RNA-seq] 70 samples shares phenotypes, mutations, leukemia
- GSE317520 Mitochondrial DNA Mutations Drive Tumor Heterogeneity in Papillary Thyroid Carcinoma 92 samples shares mitochondrial, mutations
- GSE298158 Single dose of CD137-Antibody Drug Conjugate protects non-human primate allogeneic HCT recipients against acute GVHD 70 samples shares allogeneic, recipient
- GSE310683 Detection of mitochondrial DNA mutations in T cells following 5-FU or cisplatin exposure 38 samples shares mitochondrial, mutations
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.