← BioTransfer GEO Dataset Finder
GEO series

Direct reprogramming of fibroblasts into functional macrophages [RNA-Seq]

GSE237620 Mus musculus Expression profiling by high throughput sequencing 5 samples Submitted 2024/09/18 Platform GPL21273
Summary
Macrophages derived from somatic cells by reprogramming technologies have the potential to enable the development of cell-based therapies for numerous malignant diseases. Here we report on the establishment of a novel methodology allowing for the conversion of fibroblasts into functional macrophages with pro-inflammatory phenotype just by c-Myc overexpression. Ectopic expression of c-Myc in fibroblasts in induced pluripotent stem cell (iPSC) culture medium induced the rapid appearance of CD45+ hematopoietic cell complex (HCC) intermediates with engraftment capacity as well as the repopulation of distant hematopoietic compartments. HCC intermediates were stably maintained in suspension culture and continuously generated functional and highly pure-induced macrophage (iMac) just by M-CSF cytokine stimulation. Single-cell transcriptomic analysis of HCC intermediates revealed that c-Myc up-regulates the expression of MafB, a major regulator of macrophage differentiation, to promote macrophage differentiation. Characterization of the macrophage activity showed NF-kB signaling activation and pro-inflammatory phenotype. iMac transplantation significantly reduced leukemia and breast cancer progression in animal xenograft models. Our finding indicates that reprogramming strategies of fibroblasts could help circumvent long-standing obstacles to gaining “off-the-shelf” macrophages for anti-cancer immunotherapy.
Published in
c-Myc alone is enough to reprogram fibroblasts into functional macrophages
Li S, Chen G, Huang X et al. · Journal of hematology & oncology 2024 · PMID 39267119 · doi:10.1186/s13045-024-01605-x
This dataset
Download

Direct links to NCBI, no account and no request form: the whole study as GSE237620_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 5 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA996047 and SRA study SRP450138. Searching any of these in the dataset finder brings you back here.

Samples in this study

The sample list for this study is not cached yet. Press Sort into groups and it will be fetched from NCBI.

+ 5 more — browse all 5 samples with per-sample file links →

Similar datasets

Search all mouse RNA-seq datasets in GEO →

Share this dataset

Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.