miRNA and mRNA Signatures in Human Acute Kidney Injury Tissue
Non-coding RNA profiling · human · 112 samples
- What it is
- Non-coding RNA profilingLevels of RNAs that do not code for proteins, such as miRNA or lncRNA.
- Organism
- Homo sapiens (human)
- Samples
- 112 samples: 101 distinct titles, 1 of them repeatedGroups are read from the sample names, not from the paper. Check the list below.
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
- Paper
- Inflammation primes the murine kidney for recovery by activating AZIN1 adenosine-to-inosine editingThe Journal of clinical investigation · 2024
Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE246206_RAW.tar (it can run to tens of gigabytes).
Raw sequencing reads
The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.
Also filed as BioProject PRJNA1032022 and SRA study SRP226115. Searching any of these in the dataset finder brings you back here.
How we read this: Read from 112 sample titles: 101 distinct titles with little repetition. These groups are guessed from the sample names, not taken from the paper, so check them against the sample list below before relying on them.
- GSM4128538 Renal Biopsy [AKI10]
- GSM4128539 Renal Biopsy [AKI11]
- GSM4128540 Renal Biopsy [AKI12]
- GSM4128541 Renal Biopsy [AKI13]
- GSM4128542 Renal Biopsy [AKI14]
- GSM4128543 Renal Biopsy [AKI15]
- GSM4128544 Renal Biopsy [AKI16]
- GSM4128545 Renal Biopsy [AKI17]
- GSM4128546 Renal Biopsy [AKI18]
- GSM4128547 Renal Biopsy [AKI19]
- GSM4128548 Renal Biopsy [AKI1]
- GSM4128549 Renal Biopsy [AKI20]
- GSM4128550 Renal Biopsy [AKI21]
- GSM4128551 Renal Biopsy [AKI22]
- GSM4128552 Renal Biopsy [AKI23]
- GSM4128553 Renal Biopsy [AKI24]
- GSM4128554 Renal Biopsy [AKI25]
- GSM4128555 Renal Biopsy [AKI26]
- GSM4128556 Renal Biopsy [AKI27]
- GSM4128557 Renal Biopsy [AKI28]
- GSM4128558 Renal Biopsy [AKI29]
- GSM4128559 Renal Biopsy [AKI2]
- GSM4128560 Renal Biopsy [AKI30]
- GSM4128561 Renal Biopsy [AKI31]
- GSM4128562 Renal Biopsy [AKI32]
- GSM4128563 Renal Biopsy [AKI33]
- GSM4128564 Renal Biopsy [AKI34]
- GSM4128565 Renal Biopsy [AKI35]
- GSM4128566 Renal Biopsy [AKI36]
- GSM4128567 Renal Biopsy [AKI37]
- GSM4128568 Renal Biopsy [AKI38]
- GSM4128569 Renal Biopsy [AKI39]
- GSM4128570 Renal Biopsy [AKI3]
- GSM4128571 Renal Biopsy [AKI4]
- GSM4128572 Renal Biopsy [AKI5]
- GSM4128573 Renal Biopsy [AKI6]
- GSM4128574 Renal Biopsy [AKI7]
- GSM4128575 Renal Biopsy [AKI8]
- GSM4128576 Renal Biopsy [AKI9]
- GSM4128577 Nephrectomy [REF1]
+ 72 more — browse all 112 samples with per-sample file links →
- GSE243406 Unravelling the etiology of dilated cardiomyopathy through differential miRNA-mRNA interactome 15 samples shares mirna, mrna
- GSE178411 Whole-transcriptome analysis illustrates evolving transcriptional human response to injury in acute wounds and scars 108 samples shares injury, acute
- GSE316742 SGLT2 inhibition reverses metabolic and inflammatory kidney signatures in youth with type 1 diabetes 27 samples shares signatures, kidney
- GSE315877 Metabolic surgery mitigates early kidney injury in obese youth with diabetes by suppressing mTORC1/JAK–STAT signaling 16 samples shares kidney, injury
- GSE249812 Dynamic molecular signatures of acute myocardial infarction based on transcriptomics 15 samples shares signatures, acute
- GSE277476 Altered bone marrow myelopoiesis contributes to kidney injury [scRNA-seq] 11 samples shares kidney, injury
- GSE299043 Multimodal profiling reveals tissue-directed signatures of human immune cells altered with age 654 samples shares signatures
- GSE296830 Investigation of transcriptomic signatures associated with sepsis risk in patients with infection 32 samples shares signatures
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.