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the effect of knockout Brd7 on 4T07-TGL cells under in vitro condition

GSE260497 Mus musculus Genome binding/occupancy profiling by high throughput sequencing 8 samples Submitted 2024/12/06 Platform GPL19057
Summary
Metastasis is a major cause of mortality in cancer and is likely influenced by epigenetic and gene regulatory factors. Using an in vivo screen, we demonstrated that several subunits of the polybromo-associated BAF (PBAF) complex, particularly BRD7, were required for breast cancer metastatic dormancy in lung. BRD7 loss induced metastatic outgrowth, along with modifications in epigenomic landscapes and upregulated oncogenic signaling. Breast cancer cells harboring BRD7 loss also reprogrammed the surrounding immune microenvironment, downregulating MHC-1 expression and promoting a pro-metastatic cytokine profile. Flow cytometric and single-cell analyses revealed increased levels of pro-tumorigenic neutrophils, CD8+ exhausted T cells, and CD4+ stress response T cells in lungs harboring BRD7-deficient metastases. Finally, attenuating this immunosuppressive milieu by neutrophil depletion, neutrophil extracellular trap (NET) inhibition, or immune checkpoint therapy abrogated metastatic outgrowth. These findings, for the first time, implicate BRD7 and PBAF in metastasis, pointing to targetable underlying mechanisms involving specific immune cell compartments.
Published in
Brd7 loss reawakens dormant metastasis initiating cells in lung by forging an immunosuppressive niche
Mondal J, Zhang J, Qing F et al. · Nature communications 2025 · PMID 39910049 · doi:10.1038/s41467-025-56347-2
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Also filed as BioProject PRJNA1081885 and SRA study SRP492387. Searching any of these in the dataset finder brings you back here.

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