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CCDC12 regulates selective shear of RBM47 to promote breast cancer progression

GSE267326 Homo sapiens Expression profiling by high throughput sequencing 6 samples Submitted 2024/12/31 Platform GPL16791
Summary
Purpose: TThe Coiled coil domain containing (CCDC) protein is an egg that is closely related to malignant tumors. Methods:Breast cancer cells MDA-MB-231(NC), MDA-MB-231(shCCDC12)were deeply sequenced by Illumina sequencing platform (HISEQ2500) in triplices. Genes with adjusted p values < 0.05 and |foldChange| > 2 were defined as differential expression Genes (DEGs) and enriched with GO and KEGG. Several essential genes were validated by qRT-PCR using QuantStudio 5 (Thermo Fisher) and SYBR Green assays. The White Family. Studies have shown that CCDC protein is abnormally expressed in malignant tumors and changes cell proliferation cycle by regulating cell transcription factors Stage, promote the invasion and metastasis of malignant tumor cells. How does CCDC12 as a shear gene affect the biology of breast cancer Scientific activity remains to be further studied. Results: To verify the biological properties of CCDC12 in breast cancer, we studied breast cancer MDA-MB-231 knocked down the expression of CCDC12 in the cell line, and previous studies showed that TCGA and CPTAC database scores The mRNA and protein expression levels of CCDC12 gene were significantly up-regulated in normal breast cancer tissues compared with tumor tissues. Knocking down the expression level of CCDC12 in MDA-MB-231 cells can significantly inhibit cell growth, proliferation and migration. In tumor formation experiments in nude mice, low expression of CCDC12 can inhibit tumor growth. Knock down CCDC12 on MDA-MB-231 Splicing event analysis was performed by cell transcriptome sequencing, and differential analysis found that CCDC12 expression was differentially induced in breast cancer cells The RNA binding motif protein 47 (RBM47) Skipped exon, causing RMB47 to open The structure of the reading frame changes, altering gene function. Conclusions:This study confirmed that CCDC12 regulates the invasion and metastasis of breast cancer cells by regulating the variable shear of RBM47, inducing cell cycle arrest and promoting cell apoptosis. The results of RNA-Seq were consistent with our in vitro and in vivo experiments.
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Also filed as BioProject PRJNA1111071 and SRA study SRP507354. Searching any of these in the dataset finder brings you back here.

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