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Efficient mouse embryo models from stem cells for environmental studies

GSE271157 Mus musculus Expression profiling by high throughput sequencing 5 samples Submitted 2025/07/25 Platform GPL24247
Summary
Blastoids are stem cell-derived structures that mimic natural blastocysts, including formation of the trophectoderm, epiblast, and primitive endoderm lineages. However, current methods often produce incomplete structures that do not cavitate or form sufficient primitive endoderm. We developed a new approach to enhance blastoid formation by aggregating embryonic stem cells (ESCs) with ESCs transiently expressing Gata4 (iG4-ESCs) to promote the primitive endoderm fate, followed by addition of trophoblast stem cells (TSCs). This method achieved an ~80% efficiency in forming cavitated blastocyst-like structures, termed iG4-blastoids. Single-cell RNA sequencing revealed that iG4-blastoids resemble day 4.5 blastocysts. iG4-blastoids cultured in media lacking FGF4 showed improved specification of the invasive mural trophectoderm. iG4-blastoids underwent post-implantation remodeling, with ~12% forming an egg cylinder-like structure. Notably, blastoid formation was affected by caffeine, alcohol, nicotine, and amino acid levels. Thus, iG4-blastoids are a robust model for screening diverse environmental factors for their consequences on embryogenesis.
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Direct links to NCBI, no account and no request form: the whole study as GSE271157_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 5 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1130353 and SRA study SRP517183. Searching any of these in the dataset finder brings you back here.

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