DBC1 promotes metastatic castration-resistant prostate cancer by enhancing the stability and activity of HSF1 [RNA-seq]
RNA-seq (gene expression) · human · 10 samples
- What it is
- RNA-seq (gene expression)Gene activity measured by sequencing. The summary does not mention single-cell work, so this is most likely bulk: one average per sample, the usual starting point for comparing groups.
- Organism
- Homo sapiens (human)
- Samples
- 10 samples: 10 samples, each with a distinct title — no replicated groupsGroups are read from the sample names, not from the paper. Check the list below.
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
- Paper
- HSF1-DBC1 axis drives prostate cancer progression by activating a metastatic transcriptional programExperimental & molecular medicine · 2025
Read the full summary ↓
Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE276301_RAW.tar (it can run to tens of gigabytes).
Raw sequencing reads
The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.
What the files usually look like: For RNA-seq the counts are usually a table among the supplementary files (look for 'counts', 'expression', 'FPKM' or 'TPM' in the file name). The series matrix of a sequencing study is sometimes nearly empty.
Also filed as BioProject PRJNA1156586 and SRA study SRP530420. Searching any of these in the dataset finder brings you back here.
Any grouping that defines a comparison lives in the sample characteristics, which GEO records separately from the titles.
How we read this: Read from 10 sample titles: 10 distinct titles with little repetition. These groups are guessed from the sample names, not taken from the paper, so check them against the sample list below before relying on them.
- GSM8496156 NHS_22RV1
- GSM8496157 NHS_22RV1_H1KO
- GSM8496158 NHS_22RV1_D1KO
- GSM8496159 HS_22RV1
- GSM8496160 HS_22RV1_H1KO
- GSM8496161 HS_22RV1_D1KO
- GSM8496162 NHS_SM1
- GSM8496163 HS_SM1
- GSM8496164 NHS_SM1_H1KO
- GSM8496165 NHS_SM1_D1KO
- GSE229394 Molecular and immune profiles linked to androgen response categories in metastatic castration-resistant prostate cancers (mCRPC) 56 samples shares castration-resistant, metastatic, prostate
- GSE316851 SETDB1-mediated repression of RhoB promotes EMT and metastatic progression in prostate cancer [RNA-Seq] 9 samples shares metastatic, promotes, prostate
- GSE270671 An HSF1-JMJD6-HSP feedback circuit promotes cell adaptation to proteotoxic stress [ChIP-Seq] 16 samples shares hsf1, promotes
- GSE268308 Transcriptional analysis of metastatic hormone-naïve prostate cancer primary tumour biopsies reveals a relevant role for SOX11 in prostate cancer cell dissemination [Discovery dataset] 78 samples shares metastatic, prostate
- GSE268309 Transcriptional analysis of metastatic hormone-naïve prostate cancer primary tumour biopsies reveals a relevant role for SOX11 in prostate cancer cell dissemination [Validation dataset] 32 samples shares metastatic, prostate
- GSE337264 CALB2 is a mechanoresistance gene in metastatic prostate cancer 27 samples shares metastatic, prostate
- GSE297633 IRE1 activity regulates tumour and microenvironment cell lineage states while stratifying localised and metastatic prostate cancer 25 samples shares metastatic, prostate
- GSE325471 The CDK4/6 inhibitor dalpiciclib augments the antitumor efficacy of enzalutamide in preclinical models of castration-resistant prostate cancer through inhibition of MCM4-mediated DNA replication 12 samples shares castration-resistant, prostate
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.