Mammary intraepithelial lymphocytes promote lactogenesis and offspring fitness
Single-cell RNA-seq · mouse · 2 samples
- What it is
- Single-cell RNA-seqGene activity measured in thousands of individual cells, so cell types can be told apart. Read from the summary: GEO's own type field only says 'expression profiling by sequencing', so confirm it in the paper.
- Organism
- Mus musculus (mouse)
- Samples
- 2 samples
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
- Paper
- Mammary intraepithelial lymphocytes promote lactogenesis and offspring fitnessCell · 2025
Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE279628_RAW.tar (it can run to tens of gigabytes).
Raw sequencing reads
The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.
What the files usually look like: Single-cell studies usually ship their counts as 10x files (matrix.mtx, barcodes.tsv, features.tsv), an .h5 file, or an .rds / .h5ad object that Seurat or Scanpy can open. Look for those among the supplementary files.
Also filed as BioProject PRJNA1173731 and SRA study SRP538953. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 2 more — browse all 2 samples with per-sample file links →
- GSE279627 Mammary intraepithelial lymphocytes promote lactogenesis and offspring fitness 24 samples shares intraepithelial, lactogenesis, lymphocytes, offspring, mammary, promote, fitness
- GSE292555 Microbiota promote enhanced CD39 expression in gamma delta (gd) intraepithelial lymphocytes through the activation of TCR and IL-15 signaling. 16 samples shares intraepithelial, lymphocytes, promote
- GSE288901 T cell dynamics in the mammary gland during lactogenesis 10 samples shares lactogenesis, mammary
- GSE299495 Maternal Helminths Rewire the Microbiota to Promote Offspring Antiviral Immunity via Indole-3-Propionic Acid 28 samples shares offspring, promote
- GSE273675 Parental Alcohol Exposures Promote Increased Susceptibility to Hepatocellular Carcinoma in Adult Male Offspring 20 samples shares offspring, promote
- GSE317864 The Effector Differentiation of TCRαβ+CD8αα+ Intraepithelial Lymphocytes Is Reciprocally Regulated by BCL6 and BLIMP1 20 samples shares intraepithelial, lymphocytes
- GSE305646 CCL8-mediated recruitment of cytotoxic lymphocytes by P16-positive cells promotes adverse post-ischemic cardiac remodeling 12 samples shares lymphocytes, promote
- GSE283956 CD8αα+ intraepithelial lymphocytes recruited from peripheral CD4+ and CD8+ T cells represent functionally distinct lineages 12 samples shares intraepithelial, lymphocytes
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.