The LHX1 Gene Regulatory Network Represses Pluripotency and Modulates Multiple Signaling Pathways to Specify the Embryonic Head [Neuruloid_DamID-seq]

Direct links to NCBI, no account and no request form: the whole study as GSE279967_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 6 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1175633 and SRA study SRP539914. Searching any of these in the dataset finder brings you back here.

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• GSE264614 Emerging cooperativity between Oct4 and Sox2 governs the pluripotency network in mouse early embryos [ATAC-seq] 44 samples
• GSE306261 Astrocyte glucocorticoid receptor signaling restricts neuronal plasticity [CUT&RUN] 50 samples
• GSE268172 Stable maintenance of MERVL-positive embryonic stem cells reveals sustained transcriptional programs and enhancer remodeling 45 samples
• GSE302858 Multi-tier signaling and epigenomic reprogramming drive microglial inflammatory states and functions associated with demyelination [ATAC-seq] 42 samples
• GSE267882 Foxp3 and BATF cooperatively direct cis-regulatory programs and gene expression for effector Treg cell differentiation [ChIP-Seq] 34 samples
• GSE302996 Nodal/Smad2 signaling sustains developmental pausing by repressing Pparg -mediated lipid metabolism [ATAC-seq] 24 samples
• GSE331488 A global view of cell-type-specific temporal dynamics in mammalian aging [I] 771 samples
• GSE331489 A global view of cell-type-specific temporal dynamics in mammalian aging [II] 725 samples

Search all mouse ChIP / ATAC / CUT&Tag datasets in GEO →