The RNA Binding Protein ZFP36L2 Displays Tissue-Selective mRNA Targeting in Mice [RNA-seq]
RNA-seq (gene expression) · mouse · 46 samples
- What it is
- RNA-seq (gene expression)Gene activity measured by sequencing. The summary does not mention single-cell work, so this is most likely bulk: one average per sample, the usual starting point for comparing groups.
- Organism
- Mus musculus (mouse)
- Samples
- 46 samples: 45 distinct titles, 1 of them repeatedGroups are read from the sample names, not from the paper. Check the list below.
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
- Paper
- The RNA binding protein ZFP36L2 displays tissue-selective mRNA targeting in miceRNA biology · 2026
Read the full summary ↓
Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE283043_RAW.tar (it can run to tens of gigabytes).
Raw sequencing reads
The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.
What the files usually look like: For RNA-seq the counts are usually a table among the supplementary files (look for 'counts', 'expression', 'FPKM' or 'TPM' in the file name). The series matrix of a sequencing study is sometimes nearly empty.
Also filed as BioProject PRJNA1191493 and SRA study SRP548071. Searching any of these in the dataset finder brings you back here.
How we read this: Read from 46 sample titles: 45 distinct titles with little repetition. These groups are guessed from the sample names, not taken from the paper, so check them against the sample list below before relying on them.
- GSM8654983 KO1-Spleen, Day 7
- GSM8654984 KO2-Spleen, Day 7
- GSM8654985 KO3-Spleen, Day 9
- GSM8654986 KO4-Spleen, Day 6
- GSM8654987 WT1-Spleen, Day 13
- GSM8654988 WT2-Spleen, Day 7
- GSM8654989 WT3-Spleen, Day 8
- GSM8654990 WT3-Spleen, Day 7
- GSM8654991 KO1-Ovary, Day 9
- GSM8654992 KO2-Ovary, Day 6
- GSM8654993 KO4-Ovary, Day 8
- GSM8654994 WT1-Ovary, Day 9
- GSM8654995 WT3-Ovary, Day 8
- GSM8654996 WT4-Ovary, Day 8
- GSM8654997 KO1-BMcells, Day 8
- GSM8654998 KO2-BMcells, Day 8
- GSM8654999 KO3-BMcells, Day 8
- GSM8655000 KO4-BMcells, Day 7
- GSM8655001 KO5-BMcells, Day 8
- GSM8655002 WT1-BMcells, Day 8
- GSM8655003 WT2-BMcells, Day8
- GSM8655004 WT3-BMcells, Day8
- GSM8655005 WT4-BMcells, Day 7
- GSM8655006 WT5-BMcells, Day 8
- GSM8655007 KO1-Lung, Day 8
- GSM8655008 KO2-Lung, Day 6
- GSM8655009 KO3-Lung, Day 8
- GSM8655010 WT2-Lung, Day 6
- GSM8655011 WT4-Lung, Day 7
- GSM8655012 WT5-Lung, Day 8
- GSM8655013 KO3-Kidney, Day 8
- GSM8655014 KO4-Kidney, Day 8
- GSM8655015 KO5-Kidney, Day 8
- GSM8655016 WT2-Kidney, Day 6
- GSM8655017 WT3-Kidney, Day 8
- GSM8655018 WT4-Kidney, Day 8
- GSM8655019 KO1-Liver, Day 8
- GSM8655020 KO2-Liver, Day 6
- GSM8655021 KO3-Liver, Day 7
- GSM8655022 KO4-Liver, Day 8
+ 6 more — browse all 46 samples with per-sample file links →
- GSE324467 Targeting E-Proteins Licenses cDC1 Immunogenicity for Potent Anti-Tumor Vaccination [RNA-seq] 14 samples shares targeting, protein, rna-seq
- GSE295426 Targeting branched-chain amino acids alleviates pulmonary fibrosis [RNA-seq] 54 samples shares targeting, rna-seq
- GSE260638 A MOZ-TIF2 leukemic mouse model displays KAT6 inhibitor-sensitive H3K23 propionylation and dysregulation of a set of highly active developmental genes [RNA-seq] 40 samples shares displays, rna-seq
- GSE100048 m6A mRNA methylation controls T cell homeostasis by targeting IL-7/STAT5/SOCS pathway 36 samples shares targeting, mrna
- GSE300288 Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [scRNA-seq] 31 samples shares targeting, rna-seq
- GSE281467 Coactivation of innate immune suppressive cells induces acquired resistance against cancer immunotherapy targeting the innate immune system [TIICs RNA-seq] 30 samples shares targeting, rna-seq
- GSE313351 Intestinal BMP SMADs impart the mid-villus pattern via direct targeting of villus zonation genes and by controlling a transcription factor hierarchy [RNA-seq] 26 samples shares targeting, rna-seq
- GSE330229 Accelerated RNA polymerase II elongation drives endothelial transition and plaque vulnerability: pharmacological targeting of the super elongation complex [RNA-seq] 24 samples shares targeting, rna-seq
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.