Gene expression analysis in A549 cells
Expression microarray · human · 6 samples
- What it is
- Expression microarrayGene activity read on a chip (the older technology that RNA-seq replaced).
- Organism
- Homo sapiens (human)
- Samples
- 6 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE28558_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: For arrays the series matrix is normally the normalised expression table you want; the raw array files (CEL and similar) are in the RAW.tar.
Also filed as BioProject PRJNA138993. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 6 more — browse all 6 samples with per-sample file links →
- GSE171750 A549 cell Next Gen sequencing (RNA-seq) for differential gene expression of untreated versus IL4 or IL4+ALOX15 siRNA treated cells 15 samples shares a549
- GSE303988 Effect of overexpression of VGF on gene expression of A549 and H1299 NSCLC cells 12 samples shares a549
- GSE291058 Effect of CMA inhibitor on gene expression in A549 non-small cell lung cancer cells 12 samples shares a549
- GSE282704 Effects of knockouting OGT or TR11B on gene expression in A549 lung adenocarcinoma cells 9 samples shares a549
- GSE306614 Effect of depletion of NEAT1 on gene expression of A549 cells during influenza virus infection. 6 samples shares a549
- GSE220892 Effect of DHODH inhibitor on gene expression in A549 cells 6 samples shares a549
- GSE211425 Effect of depletion of METTL3 on gene expression of A549 cells 6 samples shares a549
- GSE228143 Gene expression of A549 cells after cocultured with Trichomonas tenax 6 samples shares a549
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.