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SUMOylation orchestrates a metastable heterochromatin state on a MORC3-responsive element to silence IFNB1 at a distance

GSE292586 Homo sapiens (human) ChIP-seq / ATAC-seq (genome binding and open chromatin) 151 samples Submitted 2025/07/16 Platform GPL21103Platform GPL18573Platform GPL30172Platform GPL30173
At a glance

ChIP-seq / ATAC-seq (genome binding and open chromatin) · human · 151 samples

What it is
ChIP-seq / ATAC-seq (genome binding and open chromatin)Where proteins bind the genome, or which regions are open and active.
Organism
Homo sapiens (human)
Samples
151 samples: 51 conditions, mostly in duplicateGroups are read from the sample names, not from the paper. Check the list below.
Data you can get
A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
Paper
SUMO operates from a unique long tandem repeat to keep innate immunity in checkNucleic acids research · 2025
SuperSeries — this record groups several sub-series.
Summary (written by the submitters)
This SuperSeries is composed of the SubSeries listed below.
Published in
SUMO operates from a unique long tandem repeat to keep innate immunity in check
Goffeney A, Hendriks IA, Morel V et al. · Nucleic acids research 2025 · PMID 40744492 · doi:10.1093/nar/gkaf750
This dataset
Open GSE292586 in finder → Find more datasets →
Download · which file do I need?

Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.

1 · Just have a look

Processed table

The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.

Series matrix ↓
2 · Re-analyse it

Supplementary files

The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE292586_RAW.tar (it can run to tens of gigabytes).

All supplementary files ↗ Whole study · RAW.tar ↓
3 · Start from the raw reads

Raw sequencing reads

The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.

Raw reads on ENA ↗

What the files usually look like: Look for peak files (.bed, .narrowPeak) and signal tracks (.bigWig) among the supplementary files; the raw reads are on ENA.

Also filed as BioProject PRJNA1240249 and SRA study SRP572195. Searching any of these in the dataset finder brings you back here.

NCBI GEO page ↗ Paper (PMID 40744492) ↗
Study design
51 conditions, mostly in duplicate
Serie4, BlaER1 WT Monocytes, DMSO, Input, ×4 Serie4, BlaER1 WT Monocytes, TAK, Input, ×4 Serie4, BlaER1 WT Monocytes, DMSO, ChIP MORC3, ×4 Serie4, BlaER1 WT Monocytes, TAK, ChIP MORC3, ×4 Serie5, BlaER1 WT Lymphocytes, Input, ×4 Serie5, BlaER1 WT Lymphocytes, ChIP MORC3, ×4 BlaER1, WT, DMSO, ×4 BlaER1, WT, TAK, ×4 +73 more

Supports a between-group comparison across 121 samples.

How we read this: 51 replicated groups read from 151 sample titles; they account for 121 of them. These groups are guessed from the sample names, not taken from the paper, so check them against the sample list below before relying on them.

Samples in this study

+ 111 more — browse all 151 samples with per-sample file links →

Datasets on a similar topic

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Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.