Gene expression patterns in response to GATA2 (WT and mutants) in HL-60 cells
Expression microarray · human · 11 samples
- What it is
- Expression microarrayGene activity read on a chip (the older technology that RNA-seq replaced).
- Organism
- Homo sapiens (human)
- Samples
- 11 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE29276_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: For arrays the series matrix is normally the normalised expression table you want; the raw array files (CEL and similar) are in the RAW.tar.
Also filed as BioProject PRJNA139931. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 11 more — browse all 11 samples with per-sample file links →
- GSE336015 The effect of HEBP2-knockout on gene expression in response to SARS-CoV-2 trVLP of dHL-60 cells 6 samples shares hl-60
- GSE45642 Circadian patterns of gene expression in the human brain and disruption in major depressive disorder [control set] 670 samples shares patterns
- GSE266252 Effect of depletion of PRMT2 on gene expression in the HL-60 acute myeloid leukemia cell line 9 samples shares hl-60
- GSE51448 Gene expression analysis of estrogen receptor mutants, S463P, Y537S and D538G in MCF7 cells 36 samples shares mutants
- GSE288701 A pathogenic GATA2 zinc finger mutation restricts chromatin occupancy in human erythroid progenitor cells 36 samples shares gata2
- GSE3649 Individuality and variation in gene expression patterns in human blood. 147 samples shares patterns
- GSE276457 Transcriptome analysis in HL-60 cells after combined treatment with ATRA and palbociclib 12 samples shares hl-60
- GSE213779 Long noncoding RNA GATA2AS regulates human erythroid differentiation by controlling erythroid transcription factors binding and regulatory landscape 57 samples shares gata2
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.