← BioTransfer GEO Dataset Finder
GEO series

Prenatal exposure to particulate matter impairs behavior in offspring by reduction of NMDA receptors in hippocampus: Evidence from in vivo and ex vivo studies

GSE292770 Mus musculus (mouse) RNA-seq (gene expression) 11 samples Submitted 2026/06/11 Platform GPL24247
At a glance

RNA-seq (gene expression) · mouse · 11 samples

What it is
RNA-seq (gene expression)Gene activity measured by sequencing. The summary does not mention single-cell work, so this is most likely bulk: one average per sample, the usual starting point for comparing groups.
Organism
Mus musculus (mouse)
Samples
11 samples
Data you can get
A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
Paper
Prenatal exposure to particulate matter impairs offspring behavior via hippocampal NMDA receptor reduction: an in vivo and ex vivo studyEnvironment international · 2026
Summary (written by the submitters)
Accumulating evidences with epidemiological and experimental animal studies elicited concerns of environmental exposure to particulate matter (PM) as a risk of neurodevelopmental- and neurodegenerative disorders. Given that the susceptibility of developing brain to environmental pollutants and toxicants, exposure to PM during pregnancy cause more severe toxicity in the offspring.
Read the full summary ↓
However, it is ambiguous whether the impairment in the brain is derived from direct or indirect effect from systemic toxicity. The deposition of PM and the subsequent activation of inflammatory responses and oxidative stress in various organs further complicate the identification of the specific toxic mechanisms of PM in the brain. This study aimed to uncover this uncertainty by investigating toxicity of PM exposure in the brain and other phenotypes. Prenatal exposure of PM (200 and 400 μg/kg) through intranasal respiration causes aberrant behaviors in offspring, including cognitive deficits, hyperactivity, and anxiety. However, exposure to 200 μg/kg of PM induces aberrant neurobehaviors, while lung functions remained unaffected. Transcriptomic analyses indicated PM dysregulate gene expression in the hippocampus related to neuronal activity and synaptic development, which may contribute to behavioral impairment in offspring. Additionally, we found that PM reduced the expression of N-methyl-D-aspartate (NMDA) receptors in the hippocampus, which are crucial glutamatergic receptors for neuronal development and activity. To further confirm the effect of PM on NMDA receptor expression, we examined the expression of NMDA receptor in ex vivo cultures of hippocampal neurons using pH-sensitive green fluorescence protein pHluorin fused to NMDA receptor subunit. Ex vivo cultures (200 μg/kg) showed that PM exposure decreased NMDA receptor expression and disrupted spontaneous neuronal activity and synaptic network, while inflammatory responses are unaffected in glial cells. Our results provide insights into the direct evidence by which vulnerability of developing brain to PM exposure and necessitate developing effective strategies for mitigating PM exposure.
Published in
Prenatal exposure to particulate matter impairs offspring behavior via hippocampal NMDA receptor reduction: an in vivo and ex vivo study
Eom Y, Lee HK, Kim YK et al. · Environment international 2026 · PMID 42025021 · doi:10.1016/j.envint.2026.110270
This dataset
Download · which file do I need?

Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.

1 · Just have a look

Processed table

The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.

2 · Re-analyse it

Supplementary files

The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE292770_RAW.tar (it can run to tens of gigabytes).

3 · Start from the raw reads

Raw sequencing reads

The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.

What the files usually look like: For RNA-seq the counts are usually a table among the supplementary files (look for 'counts', 'expression', 'FPKM' or 'TPM' in the file name). The series matrix of a sequencing study is sometimes nearly empty.

Also filed as BioProject PRJNA1241227 and SRA study SRP572828. Searching any of these in the dataset finder brings you back here.

Samples in this study

The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.

+ 11 more — browse all 11 samples with per-sample file links →

Datasets on a similar topic

Search all mouse RNA-seq datasets in GEO →

Share this dataset

Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.