← BioTransfer GEO Dataset Finder
GEO series

Androgenic Effects of 11-Oxygenated Androgens in Castration-Resistant Prostate Cancer

GSE296144 Homo sapiens (human) RNA-seq (gene expression) 63 samples Submitted 2025/10/10 Platform GPL24676
At a glance

RNA-seq (gene expression) · human · 63 samples

What it is
RNA-seq (gene expression)Gene activity measured by sequencing. The summary does not mention single-cell work, so this is most likely bulk: one average per sample, the usual starting point for comparing groups.
Organism
Homo sapiens (human)
Topic
Prostate cancerThis series is part of our curated briefing on it.
Samples
63 samples: 21 conditions, mostly in triplicateGroups are read from the sample names, not from the paper. Check the list below.
Data you can get
A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
Paper
Androgenic effects of 11-oxyandrogens in castration-resistant prostate cancerBMC cancer · 2025
Summary (written by the submitters)
Investigations of CRPC cell models demonstrate that both 11oxygenated androgens 11Ketotestesterone (11KT) and 11-hydroxytestosterone (11OHT) drive robust AR-mediated proliferative responses and significantly modulate gene and protein expression profiles, paralleling canonical androgens. They also exhibit unique transcriptional and post-transcriptional effects that include potential AR-independent pathways. Furthermore, the AR antagonist enzalutamide effectively inhibits their androgenic actions, suggesting they are primarily AR-mediated.
Published in
Androgenic effects of 11-oxyandrogens in castration-resistant prostate cancer
Lapointe-Belleau A, Rouleau M, Villeneuve L et al. · BMC cancer 2025 · PMID 41257618 · doi:10.1186/s12885-025-15193-7
This dataset
Open GSE296144 in finder → Find more human RNA-seq datasets → Prostate cancer landscape →
Download · which file do I need?

Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.

1 · Just have a look

Processed table

The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.

Series matrix ↓
2 · Re-analyse it

Supplementary files

The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE296144_RAW.tar (it can run to tens of gigabytes).

All supplementary files ↗ Whole study · RAW.tar ↓
3 · Start from the raw reads

Raw sequencing reads

The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.

Raw reads on ENA ↗

What the files usually look like: For RNA-seq the counts are usually a table among the supplementary files (look for 'counts', 'expression', 'FPKM' or 'TPM' in the file name). The series matrix of a sequencing study is sometimes nearly empty.

Also filed as BioProject PRJNA1257886 and SRA study SRP582672. Searching any of these in the dataset finder brings you back here.

NCBI GEO page ↗ Paper (PMID 41257618) ↗
Study design
21 conditions, mostly in triplicate
DU145_DMSO ×3 DU145_R1881 ×3 DU145_R1881E ×3 DU145_11KT ×3 DU145_11KTE ×3 DU145_11OHT ×3 DU145_11OHTE ×3 LAPC4_DMSO ×3 +13 more

Supports a between-group comparison across 63 samples.

How we read this: 21 replicated groups read from 63 sample titles; they account for 63 of them. These groups are guessed from the sample names, not taken from the paper, so check them against the sample list below before relying on them.

Samples in this study

+ 23 more — browse all 63 samples with per-sample file links →

More Prostate cancer datasets

Search all human RNA-seq datasets in GEO →

Share this dataset

Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.