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Transcriptomic comparison of hyaluronan-stimulated aTC1-6 cells and type 1 diabetes a cells

GSE297634 Mus musculus Expression profiling by high throughput sequencing 6 samples Submitted 2026/05/21 Platform GPL34871
Summary
Type 1 diabetes (T1D) is driven by the immune-mediated destruction of pancreatic b cells. Hyaluronan (HA), an extracellular matrix glycosaminoglycan, accumulates in pancreatic islets in patients with T1D and animal models, and has been implicated in promoting chronic inflammation. Inhibition of HA synthesis in T1D model mice attenuates disease progression, suggesting that HA accumulation contributes to disease deterioration. While b cells are selectively targeted and depleted in T1D, a cells that secrete glucagon are relatively preserved from immune-mediated destruction. Therefore, we hypothesized that accumulated HA may impair a-cell function and thereby contribute to T1D pathophysiology. To investigate this, we performed RNA sequencing on HA-treated a-cell lines and compared the transcriptional profiles to publicly available datasets from a cells isolated from T1D donors. This comparison identified several commonly downregulated genes, potentially reflecting HA-induced -cell dysfunction. These findings provide novel insights into the contribution of the islet microenvironment to the pathogenesis of T1D.
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Direct links to NCBI, no account and no request form: the whole study as GSE297634_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 6 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1265499 and SRA study SRP586533. Searching any of these in the dataset finder brings you back here.

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