GEO series
SOX10 regulates melanoma metastasis through the IRF1-ITGA3/EphA2-FAK pathway.
GSE298445
Homo sapiens
Expression profiling by high throughput sequencing
12 samples
2025/12/03
GPL24676
Summary
Melanoma heterogeneity is associated with an enhanced metastatic potential. Although an invasive state with MITFlow/AXLhigh in the melanoma subpopulation has been identified using a single-cell RNA-seq analysis, the mechanisms by which these cells acquire their invasiveness remains unclear. In the present study, we identified the gene set related to cell migration as one of the enriched gene ontologies after the knockdown of SOX10 in melanoma. We demonstrated that the knockdown of SOX10 induced melanoma migration independent of MITF reduction or AXL induction. An in silico analysis and in vitro analysis revealed that ITGA3 and EphA2 were downstream molecules for SOX10-mediated migration, and were required for adhesive and random motile abilities, respectively. In addition, the oncogenic activation of MAPK was required for increased random motility through EphA2 phosphorylation at the Ser 897 residue. We also demonstrated the significance of IRF1 in the induction of both ITGA3 and EphA2 after the knockdown of SOX10. The FAK inhibitor, defactinib, suppressed metastasis in vivo. In summary, the present study showed that the reduced expression of SOX10 induced melanoma metastasis through the IRF1-ITGA3/EphA2-FAK pathway and also suggests the potential of FAK inhibitors as candidate drugs for the treatment of melanoma metastasis.
Download
NCBI GEO page ↗
Paper (PMID 40808260) ↗
{# Names what the click gives you. "Open in finder" meant nothing to a
visitor who arrived from a search engine and has never seen the tool. #}
Find more
human RNA-seq datasets →
Similar datasets
- GSE328275 Single-cell RNA sequencing of CD45+ immune cells across primary tumor, sentinel tumor-draining lymph node, and axillary lymph node in treatment-naive triple-negative breast cancer 28 samples
- GSE341753 Cohesin loading at regulatory elements shapes 3D genome folding during erythropoiesis [RNA-Seq] 12 samples
- GSE319969 Spatial and Bulk Transcriptomic Profiling Defines the Molecular Evolution of Cutaneous Squamous Cell Carcinoma and Reveals Stage-Specific Biomarkers of Clinical Relevance [RNA-Seq] 24 samples
- GSE342462 Integrated transcriptomic and bioelectrical profiling of stem-like cellular states in a colorectal cancer using SdFFF and UHF-DEP 12 samples
- GSE313035 METIMMOX: Colorectal Cancer METastasis - Shaping Anti-tumor IMMunity by OXaliplatin 67 samples
- GSE341139 A conserved HAND2-BMP5-SMAD1/5/9 axis drives hepatic stellate cell activation and extracellular matrix overproduction in multiple fibrotic etiologies 10 samples
- GSE274275 Effect of depletion of NSUN4 on gene expression of NCI-H226 cells [RNA-seq] 6 samples
- GSE339456 Integrated bulk and spatial transcriptomic analysis identifies progression-associated molecular signatures in biopsy-proven hypertensive nephropathy [RNA-seq] 35 samples
Share this dataset
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.