← BioTransfer GEO Dataset Finder
GEO series

A Single-cell Transcriptomic Profiling Reveals the Effects of Chronic House Dust Mite Exposure on the Murine Lung Microenvironment

GSE300531 Mus musculus Expression profiling by high throughput sequencing 4 samples Submitted 2025/10/29 Platform GPL24247
Summary
House dust mite (HDM) is a common environmental aeroallergen linked to the development of allergic airway inflammation and asthma. While the effects of acute HDM exposure on T helper 2 (Th2)-driven allergic responses and pulmonary eosinophilia are well established in murine models, the impact of chronic HDM exposure on other inflammatory responses, particularly those involving interleukin-1β (IL-1β) and neutrophilia, remains poorly defined. To address this gap, we performed single-cell RNA sequencing (scRNA-seq) to examine lung immune responses in wild-type and IL-1β-deficient mice following chronic HDM exposure. Our data reveal that HDM promotes the recruitment of diverse immune cell populations in the lungs, including neutrophils, alternatively activated (M2-polarized) macrophages, B-2 (follicular) B cells, and multiple CD4 regulatory and effector T cell subsets. IL-1β signaling was essential for supporting neutrophil and Th17 responses, whereas its absence enhanced Th2-skewed immune polarization in the lung. These immune populations differently contribute to the development or resolution of lung inflammation in an IL-1β-dependent or -independent manner. This study offers a detailed characterization of the cellular and molecular alterations induced by chronic HDM exposure and reveals previously unrecognized roles for IL-1β in orchestrating chronic lung inflammation.
Published in
Single-cell transcriptomics reveals immune remodeling of the murine lung microenvironment following chronic house dust mite exposure
Chang H, Zeng L, Malakoutikhah Z et al. · Frontiers in immunology 2025 · PMID 41445736 · doi:10.3389/fimmu.2025.1652539
This dataset
Download

Direct links to NCBI, no account and no request form: the whole study as GSE300531_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 4 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1281111 and SRA study SRP594022. Searching any of these in the dataset finder brings you back here.

Samples in this study

The sample list for this study is not cached yet. Press Sort into groups and it will be fetched from NCBI.

+ 4 more — browse all 4 samples with per-sample file links →

Similar datasets

Search all mouse RNA-seq datasets in GEO →

Share this dataset

Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.