HFD-inducued metabolic syndrome is promoted by JNK7b isoform.
RNA-seq (gene expression) · mouse · 69 samples
- What it is
- RNA-seq (gene expression)Gene activity measured by sequencing. The summary does not mention single-cell work, so this is most likely bulk: one average per sample, the usual starting point for comparing groups.
- Organism
- Mus musculus (mouse)
- Samples
- 69 samples: 69 samples, each with a distinct title — no replicated groupsGroups are read from the sample names, not from the paper. Check the list below.
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
- Paper
- Mutually exclusive alternative pre-mRNA splicing promotes adaptive metabolic stress signaling by JNKProceedings of the National Academy of Sciences of the United States of America · 2026
Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE302874_RAW.tar (it can run to tens of gigabytes).
Raw sequencing reads
The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.
What the files usually look like: For RNA-seq the counts are usually a table among the supplementary files (look for 'counts', 'expression', 'FPKM' or 'TPM' in the file name). The series matrix of a sequencing study is sometimes nearly empty.
Also filed as BioProject PRJNA1292733 and SRA study SRP601492. Searching any of these in the dataset finder brings you back here.
Any grouping that defines a comparison lives in the sample characteristics, which GEO records separately from the titles.
How we read this: Read from 69 sample titles: 69 distinct titles with little repetition. These groups are guessed from the sample names, not taken from the paper, so check them against the sample list below before relying on them.
- GSM9112753 CL1-GFP-1
- GSM9112754 CL2-GFP-2
- GSM9112755 CL3-GFP-3
- GSM9112756 CL4-CRE-1
- GSM9112757 CL5-CRE-2
- GSM9112758 CL6-CRE-3
- GSM9112759 CL7-FLPO-1
- GSM9112760 CL8-FLPO-2
- GSM9112761 CL10-GFP-1
- GSM9112762 CL11-GFP-2
- GSM9112763 CL12-GFP-3
- GSM9112764 CL13-CRE-1
- GSM9112765 CL14-CRE-2
- GSM9112766 CL15-CRE-3
- GSM9112767 CL16-FLPO-1
- GSM9112768 CL17-FLPO-2
- GSM9112769 CL18-FLPO-3
- GSM9112770 CL19-GFP-1
- GSM9112771 CL20-GFP-2
- GSM9112772 CL21-GFP-3
- GSM9112773 CL22-GFP-4
- GSM9112774 CL23-CRE-1
- GSM9112775 CL24-CRE-2
- GSM9112776 CL25-FLPO-1
- GSM9112777 CL26-FLPO-2
- GSM9112778 CL27-FLPO-3
- GSM9112779 CL28-FLPO-4
- GSM9112780 CL30-GFP-1
- GSM9112781 CL31-GFP-2
- GSM9112782 CL32-GFP-3
- GSM9112783 CL33-CRE-1
- GSM9112784 CL34-CRE-2
- GSM9112785 CL35-CRE-3
- GSM9112786 CL36-FLPO-1
- GSM9112787 CL37-FLPO-2
- GSM9112788 CL38-FLPO-3
- GSM9112789 CL39-FLPO-4
- GSM9112790 CL40-GFP-1
- GSM9112791 CL41-GFP2
- GSM9112792 CL42-CRE-1
+ 29 more — browse all 69 samples with per-sample file links →
- GSE277336 HFD-inducued metabolic syndrome is promoted by JNK7b isoform 20 samples shares jnk7b, hfd-inducued, promoted, isoform
- GSE278155 HFD-inducued metabolic syndrome is promoted by JNK7b isoform [Liver_RNAseq] 16 samples shares jnk7b, hfd-inducued, promoted, isoform
- GSE297857 HFD-inducued metabolic syndrome is promoted by JNK7b isoform 6 samples shares jnk7b, hfd-inducued, promoted, isoform
- GSE303383 HFD-induced metabolic syndrome is promoted by JNK7b isoform 12 samples shares jnk7b, promoted, isoform
- GSE248964 Isoform Usage as a Distinct Regulatory Layer Driving Nutrient-Responsive Metabolic Adaptation (RNA-seq) 117 samples shares isoform
- GSE298875 Targeted p63 isoform modulation corrects dominant mutations in AEC syndrome without disrupting epidermal homeostasis 6 samples shares isoform
- GSE297765 Targeted p63 isoform modulation corrects dominant mutations in AEC syndrome without disrupting epidermal homeostasis [RNA-seq Mouse] 6 samples shares isoform
- GSE274544 Single cell profiling reveals three endothelial to hematopoietic transitions with divergent isoform expression landscapes [scRNA-Seq] 1494 samples shares isoform
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.