The obesity-linked peptide SP16 regulates adipocytes through GIP and insulin receptor
RNA-seq (gene expression) · human · 90 samples
- What it is
- RNA-seq (gene expression)Gene activity measured by sequencing. The summary does not mention single-cell work, so this is most likely bulk: one average per sample, the usual starting point for comparing groups.
- Organism
- Homo sapiens (human)
- Samples
- 90 samples
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
Read the full summary ↓
Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE303737_RAW.tar (it can run to tens of gigabytes).
Raw sequencing reads
The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.
What the files usually look like: For RNA-seq the counts are usually a table among the supplementary files (look for 'counts', 'expression', 'FPKM' or 'TPM' in the file name). The series matrix of a sequencing study is sometimes nearly empty.
Also filed as BioProject PRJNA1297185 and SRA study SRP603704. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 90 more — browse all 90 samples with per-sample file links →
- GSE165932 Insulin resistance rewires the metabolic gene program and glucose utilization in human white adipocytes 16 samples shares adipocytes, insulin
- GSE335322 Functional annotation of insulin-responsive genes in human adipocytes reveals PLCXD1 as a lipid storage regulator 8 samples shares adipocytes, insulin
- GSE322851 Inducible XIST-mediated trisomy 21 correction uncovers a USP16-p16 senescence axis driving epileptogenesis in Down syndrome 45 samples shares sp16
- GSE269993 Exploring the functional, protective, and transcriptomic effects of GIP on cytokine-exposed human pancreatic islets and EndoC-βH5 cells 16 samples shares gip
- GSE270469 A live attenuated SARS-CoV-2 vaccine constructed by dual inactivation of NSP16 and ORF3a 12 samples shares sp16
- GSE271017 Bulk transcriptomic analysis of GIP-expressing cells in organoids derived from human duodenum. 7 samples shares gip
- GSE255692 CAMKV inhibitor, OTSSP167 induces transcriptomic changes in NGP cells 6 samples shares sp16
- GSE324211 Inducible XIST-mediated trisomy 21 correction uncovers a USP16-p16 senescence axis driving epileptogenesis in Down syndrome [scRNA-Seq] 4 samples shares sp16
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.