Tape strips capture immune and epidermal hyperplasia markers in the major orphan ichthyoses
RNA-seq (gene expression) · human · 45 samples
- What it is
- RNA-seq (gene expression)Gene activity measured by sequencing. The summary does not mention single-cell work, so this is most likely bulk: one average per sample, the usual starting point for comparing groups.
- Organism
- Homo sapiens (human)
- Samples
- 45 samples: 5 conditions, mostly with about 18 replicates eachGroups are read from the sample names, not from the paper. Check the list below.
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
- Paper
- Tape strips capture immune and epidermal hyperplasia markers in the major orphan ichthyosesThe Journal of investigative dermatology · 2026
Read the full summary ↓
Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE305032_RAW.tar (it can run to tens of gigabytes).
Raw sequencing reads
The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.
What the files usually look like: For RNA-seq the counts are usually a table among the supplementary files (look for 'counts', 'expression', 'FPKM' or 'TPM' in the file name). The series matrix of a sequencing study is sometimes nearly empty.
Also filed as BioProject PRJNA1304266 and SRA study SRP607970. Searching any of these in the dataset finder brings you back here.
Supports a between-group comparison across 45 samples.
How we read this: 5 replicated groups read from 45 sample titles; they account for 45 of them. These groups are guessed from the sample names, not taken from the paper, so check them against the sample list below before relying on them.
- GSM9161261 Control12 Control
- GSM9161262 Control7 Control
- GSM9161263 Control6 Control
- GSM9161264 Control5 Control
- GSM9161265 Control4 Control
- GSM9161266 Control3 Control
- GSM9161267 CIE4 CIE
- GSM9161268 CIE5 CIE
- GSM9161269 EI5 EI
- GSM9161270 NS10 NS
- GSM9161271 CIE3 CIE
- GSM9161272 CIE6 CIE
- GSM9161273 Control8 Control
- GSM9161274 Control11 Control
- GSM9161275 EI4 EI
- GSM9161276 EI3 EI
- GSM9161277 Control10 Control
- GSM9161278 Control9 Control
- GSM9161279 CIE2 CIE
- GSM9161280 LI7 LI
- GSM9161281 NS9 NS
- GSM9161282 LI6 LI
- GSM9161283 LI5 LI
- GSM9161284 EI2 EI
- GSM9161285 CIE1 CIE
- GSM9161286 NS8 NS
- GSM9161287 LI4 LI
- GSM9161288 NS7 NS
- GSM9161289 NS6 NS
- GSM9161290 LI3 LI
- GSM9161291 LI2 LI
- GSM9161292 NS5 NS
- GSM9161293 LI1 LI
- GSM9161294 NS4 NS
- GSM9161295 NS2 NS
- GSM9161296 EI1 EI
- GSM9161297 NS1 NS
- GSM9161298 Control13 Control
- GSM9161299 Control14 Control
- GSM9161300 Control16 Control
+ 5 more — browse all 45 samples with per-sample file links →
- GSE245608 Transcriptomic evaluation of skin tape-strips in children with allergic asthma uncovers epidermal barrier dysfunction and asthma-associated biomarkers abnormalities 32 samples shares epidermal, markers, strips
- GSE310114 The Underlying Dermal Scaffold Affects Molecular Differentiation Markers in Three-Dimensional Human Epidermal Equivalents 12 samples shares epidermal, markers
- GSE157657 Blood transcriptomics for diagnosis, risk, and treatment monitoring in tuberculosis reveal the evolution and resolution of TB disease: Does one signature capture all? 760 samples shares capture
- GSE143584 Gene expression from laser capture microdissected epithelium and stroma during pancreatic carcinogenesis 366 samples shares capture
- GSE272333 TOWARDS THE GENERATION OF A LASER CAPTURE MICRODISSECTION-BASED HUMAN ANAGEN HAIR FOLLICLE TRANSCRIPTOME ATLAS 110 samples shares capture
- GSE330098 Multi-tissue microphysiological system captures integrated responses to nutritional overload and metabolic therapy 108 samples shares capture
- GSE311770 Minimally invasive 1 mm skin biopsies capture regional transcriptomic heterogeneity in vitiligo 105 samples shares capture
- GSE295462 Surface marker identification to capture live circulating tumor cells in metastatic triple negative breast cancer 47 samples shares capture
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.