Succinate-GPR91 signaling promotes cardiomyocyte metabolic reprogramming and NAD⁺ production to alleviate HFpEF
RNA-seq (gene expression) · mouse · 16 samples
- What it is
- RNA-seq (gene expression)Gene activity measured by sequencing. The summary does not mention single-cell work, so this is most likely bulk: one average per sample, the usual starting point for comparing groups.
- Organism
- Mus musculus (mouse)
- Samples
- 16 samples: 4 × G91 HFpEF vs 4 × G91 HFpEF+SUC vs 4 × MG91 HFpEF vs 4 × MG91 HFpEF+SUCGroups are read from the sample names, not from the paper. Check the list below.
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
- Paper
- Succinate-GPR91 signaling promotes cardiomyocyte metabolic reprogramming and NAD(+) production to alleviate HFpEFCardiovascular diabetology · 2025
Read the full summary ↓
Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE307669_RAW.tar (it can run to tens of gigabytes).
Raw sequencing reads
The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.
What the files usually look like: For RNA-seq the counts are usually a table among the supplementary files (look for 'counts', 'expression', 'FPKM' or 'TPM' in the file name). The series matrix of a sequencing study is sometimes nearly empty.
Also filed as BioProject PRJNA1322494 and SRA study SRP618899. Searching any of these in the dataset finder brings you back here.
Supports a between-group comparison across 16 samples.
How we read this: 4 replicated groups read from 16 sample titles; they account for 16 of them. These groups are guessed from the sample names, not taken from the paper, so check them against the sample list below before relying on them.
- GSM9229063 G91 HFpEF1 G91 HFpEF
- GSM9229064 G91 HFpEF2 G91 HFpEF
- GSM9229065 G91 HFpEF3 G91 HFpEF
- GSM9229066 G91 HFpEF4 G91 HFpEF
- GSM9229067 G91 HFpEF+SUC1 G91 HFpEF+SUC
- GSM9229068 G91 HFpEF+SUC2 G91 HFpEF+SUC
- GSM9229069 G91 HFpEF+SUC3 G91 HFpEF+SUC
- GSM9229070 G91 HFpEF+SUC4 G91 HFpEF+SUC
- GSM9229071 MG91 HFpEF1 MG91 HFpEF
- GSM9229072 MG91 HFpEF2 MG91 HFpEF
- GSM9229073 MG91 HFpEF3 MG91 HFpEF
- GSM9229074 MG91 HFpEF4 MG91 HFpEF
- GSM9229075 MG91 HFpEF+SUC1 MG91 HFpEF+SUC
- GSM9229076 MG91 HFpEF+SUC2 MG91 HFpEF+SUC
- GSM9229077 MG91 HFpEF+SUC3 MG91 HFpEF+SUC
- GSM9229078 MG91 HFpEF+SUC4 MG91 HFpEF+SUC
- GSE284354 Excitation-contraction coupling, cardiomyocyte electrophysiology, and transcriptome changes in two translational HFpEF murine models: Aetiology and sex-dependent differences 23 samples shares cardiomyocyte, hfpef
- GSE267452 Loss of Nuclear Receptor Nr4a3 Alleviates Cellular Senescence to Promote Adult Direct Cardiac Reprogramming 54 samples shares reprogramming, alleviate
- GSE278100 Foxa1-Mediated Chromatin Remodeling and Enhancer Reprogramming Promotes Gemcitabine Resistance in Pancreatic Cancer 54 samples shares reprogramming, promotes
- GSE279042 Reprogramming of epidermal keratinocytes by PITX1 transforms the cutaneous cellular landscape and promotes wound healing [CUT&Tag] 30 samples shares reprogramming, promotes
- GSE22292 Gene expression in mouse neonatal cardiomyocytes, cardiac fibroblasts, reprogramming failed GFP- cells, and GFP+ iCMs 18 samples shares cardiomyocyte, reprogramming
- GSE267447 Loss of Nuclear Receptor Nr4a3 Alleviates Cellular Senescence to Promote Adult Direct Cardiac Reprogramming (ATAC-Seq) 16 samples shares reprogramming, alleviate
- GSE306458 ACVR1-mediated glycolytic reprogramming promotes histone lactylation and neuronal pyroptosis in neuropathic pain {ChIP-seq] 12 samples shares reprogramming, promotes
- GSE330309 Impact of Sex Chromosomes and Gonad Type in Stress Susceptibility in Corticostriatal Brain Regions 96 samples shares nad
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.