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Peristaltic forces drive tumor cell invasion in colorectal cancer [scRNA-seq]

GSE311338 Homo sapiens Expression profiling by high throughput sequencing 3 samples Submitted 2026/06/30 Platform GPL24676
Summary
Mechanical forces are known to influence the progression of cancer, however, the impact of naturally occurring physical forces remains less well understood. With the advent of organ-on-chip (OOC) technology, preclinical models can now incorporate human-relevant physiological forces and allow for more precise investigation of their effects. In this study, we explore how the peristaltic motions of the gut influence the early metastatic spread of colorectal cancer (CRC). Specifically, we use a CRC OOC model consisting of tumor epithelial and endothelial channels separated by a porous membrane to investigate, through live cell imaging and ‘omics-based approaches, how peristaltic compressions enhance the invasiveness of colorectal cancer cells. scRNA-seq analysis revealed that invaded tumor cells exhibited significantly higher expression of mechanosensitive genes compared to non-invaded cells. Among the enriched genes was the mechanosensitive calcium ion channel, PIEZO1. Knockdown of PIEZO1 disrupted YAP1-mediated mechanotransduction and reduced invasive capability. In contrast, exposure to peristaltic contractions enhanced invasiveness. Analysis of publicly available datasets confirmed that elevated tumor mechanosensitive gene expression is associated with poorer clinical outcomes. These findings reveal how physiological mechanical forces drive the invasive behavior of mechanosensitive CRC tumors.
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Direct links to NCBI, no account and no request form: the whole study as GSE311338_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 3 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1368979 and SRA study SRP648800. Searching any of these in the dataset finder brings you back here.

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