NCOR2 represses MHC class I molecule expression to drive metastatic progression of breast cancer
ChIP-seq / ATAC-seq (genome binding and open chromatin) · mouse · 14 samples
- What it is
- ChIP-seq / ATAC-seq (genome binding and open chromatin)Where proteins bind the genome, or which regions are open and active.
- Organism
- Mus musculus (mouse)
- Samples
- 14 samples
- Data you can get
- A processed table (series matrix) and supplementary files from NCBI; the raw sequencing reads from ENA. Which of these hold counts depends on the study, so check the file list.
- Paper
- NCOR2 represses MHC class I molecule expression to drive metastatic progression of breast cancerNature communications · 2026
Read the full summary ↓
Direct links to NCBI and ENA, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need, or the whole study as GSE320158_RAW.tar (it can run to tens of gigabytes).
Raw sequencing reads
The original FASTQ files, straight from the sequencer, held at ENA. Large, and you align them yourself, so only choose this if you need to re-process the study from scratch.
What the files usually look like: Look for peak files (.bed, .narrowPeak) and signal tracks (.bigWig) among the supplementary files; the raw reads are on ENA.
Also filed as BioProject PRJNA1426978 and SRA study SRP678682. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 14 more — browse all 14 samples with per-sample file links →
- GSE269616 Comprehensive alpha, beta, and delta cell transcriptomics reveal an association of cellular aging with MHC class I upregulation 27 samples shares mhc, class
- GSE302629 Loss of tumor cell MHC Class II drives MAPK-inhibitor insensitivity of BRAF-mutant anaplastic thyroid cancers [RNA-seq] 24 samples shares mhc, class
- GSE307545 Transcriptional profiling of memory B cells that form during influenza infection of majorhistocompatibility class II (MHC-II) knockout mice. 12 samples shares mhc, class
- GSE275130 Mediator Subunit MED4 Enforces Metastatic Dormancy in Breast Cancer (Histone ChIP-seq_shMed4) 36 samples shares metastatic, breast
- GSE255473 Mediator Subunit MED4 Enforces Metastatic Dormancy in Breast Cancer (ATAC-seq_shMed1) 9 samples shares metastatic, breast
- GSE261780 Iron oxide nanoparticles inhibit tumor progression and suppress lung metastases in mouse models of breast cancer 72 samples shares progression, breast
- GSE301299 Multi-omics analysis identifies intrinsic Trp53 driven metastatic breast cancer subtypes [RNA-seq] 51 samples shares metastatic, breast
- GSE263963 The temporal progression of lung immune remodeling during breast cancer metastasis 38 samples shares progression, breast
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.