Gene expression in synovial membranes from patients with early and end-stage osteoarthritis
Expression microarray · human · 19 samples
- What it is
- Expression microarrayGene activity read on a chip (the older technology that RNA-seq replaced).
- Organism
- Homo sapiens (human)
- Samples
- 19 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Read the full summary ↓
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE32317_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: For arrays the series matrix is normally the normalised expression table you want; the raw array files (CEL and similar) are in the RAW.tar.
Also filed as BioProject PRJNA147293. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 19 more — browse all 19 samples with per-sample file links →
- GSE248453 Gene expression profile at single cell level of synovial cells from patients with late-stage knee osteoarthritis 8 samples shares osteoarthritis, synovial
- GSE293276 Synovial Dysregulation in Ankle Osteoarthritis: Molecular Insights and Pathogenetic Pathways [RNA-Seq 1] 34 samples shares osteoarthritis, synovial
- GSE124928 Transcriptomic profiling of osteoarthritis synovial macrophages reveals a tolerized phenotype compounded by a weak corticosteroid response 48 samples shares osteoarthritis, synovial
- GSE338779 Single-cell RNA-seq of synovial fluid cells from osteoarthritis control patients 3 samples shares osteoarthritis, synovial
- GSE231848 Simulated microgravity recapitulates early molecular events and sex differences of knee osteoarthritis 24 samples shares osteoarthritis, early
- GSE279915 Complexity of synovial fluid-derived monocyte–macrophage lineage cells in knee osteoarthritis 12 samples shares osteoarthritis, synovial
- GSE114007 Identification of transcription factors responsible for dysregulated networks in human osteoarthritis cartilage by global gene expression analysis 38 samples shares osteoarthritis
- GSE55235 Identification of rheumatoid arthritis and osteoarthritis patients by transcriptome-based rule set generation 30 samples shares osteoarthritis
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.