Single-cell RNA sequencing (scRNA-seq) of murine hematopoietic stem and progenitor cells (HSPCs) and mesenchymal stromal cells (MSCs) under cardiac stress induced by transverse aortic constriction.

Direct links to NCBI, no account and no request form: the whole study as GSE326120_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 8 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA1443545 and SRA study SRP687029. Searching any of these in the dataset finder brings you back here.

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• GSE300288 Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [scRNA-seq] 31 samples
• GSE292862 Modelling mouse embryogenesis from chemically induced totipotent stem cells 22 samples
• GSE326100 scRNA-seq of mouse cochlea organoid cells 768 samples
• GSE278990 Single-cell screens identify ADAM12 as a fibroblast checkpoint impeding anti-tumor immunity 73 samples
• GSE327176 Single-cell transcriptomic profiling unveils tumor-mediated reprogramming of neutrophils and their unique vulnerability that inhibits metastasis 25 samples
• GSE309993 Effector differentiation by stem-like intraepithelial γδ T cells is required for host defense against infection 25 samples
• GSE297921 Single-cell sequencing of CD45+ cells isolated from nasal mucosa of mice 18 samples
• GSE305453 Perturb-seq uncovers pathological obstacles to direct cardiac reprogramming in vivo 15 samples

Search all mouse RNA-seq datasets in GEO →