ChIP-seq and mRNA-seq experiment to find the direct target genes of ATF4 and CHOP

Direct links to NCBI, no account and no request form: the whole study as GSE35681_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 10 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA152405 and SRA study SRP010861. Searching any of these in the dataset finder brings you back here.

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+ 10 more — browse all 10 samples with per-sample file links →

• GSE312302 NMuMG PBRM1 RNA-seq, ATAC-seq, and ChIP-seq 171 samples
• GSE267452 Loss of Nuclear Receptor Nr4a3 Alleviates Cellular Senescence to Promote Adult Direct Cardiac Reprogramming 54 samples
• GSE305975 Basal level of ATF4 promotes T cell readiness for activation-induced proliferation 29 samples
• GSE267884 Foxp3 and BATF cooperatively direct cis-regulatory programs and gene expression for effector Treg cell differentiation [scMultiome] 16 samples
• GSE266317 RNA-seq and ChIP-seq analysis of H3K27ac, H3K27me3, H3K9me2, and JMJD1A in 3T3-L1 cells and ChIP-seq analysis of NFIC in imSVF cells. 14 samples
• GSE217664 Decoding Trp53 regulatory program in various tissues and organs 404 samples
• GSE296994 H3K9 di-methylation dynamics underlies mouse minor zygotic genome activation 174 samples
• GSE291274 The placentalia specific histone H3.4 promotes germ cell development and reproductive fitness 167 samples

Search all mouse RNA-seq datasets in GEO →