Human cerebellum, frontal cortex [BA4, BA9] and caudate nucleus HD tissue experiment
Expression microarray · human · 404 samples
- What it is
- Expression microarrayGene activity read on a chip (the older technology that RNA-seq replaced).
- Organism
- Homo sapiens (human)
- Samples
- 404 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE3790_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: For arrays the series matrix is normally the normalised expression table you want; the raw array files (CEL and similar) are in the RAW.tar.
Also filed as BioProject PRJNA93987. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 404 more — browse all 404 samples with per-sample file links →
- GSE54568 Expression data from human brain dorsolateral prefrontal cortex - including control samples and samples with major depression disorders (30 samples BA9_F) 30 samples shares ba9, frontal, cortex
- GSE54567 Expression data from human brain dorsolateral prefrontal cortex - including control samples and samples with major depression disorders (28 samples BA9_M) 28 samples shares ba9, frontal, cortex
- GSE68719 mRNA-Seq expression and MS3 proteomics profiling of human post-mortem BA9 brain tissue for Parkinson Disease and neurologically normal individuals 73 samples shares ba9
- GSE9992 Molecular and transcriptional characterization of chromosome 17p loss in chronic lymphocytic leukemia, experiment A 60 samples shares experiment
- GSE18496 Breast Cell Lines: Experimental vs. Mixed Reference 51 samples shares experiment
- GSE134356 Protein-coding and non-coding RNA expression in whole blood leukocytes during experimental human endotoxemia. 36 samples shares experiment
- GSE5099 Expression Data from Macrophage Maturation and Polarization Experiment 30 samples shares experiment
- GSE48016 MAQC-III/SEQC Main Study ABCD titration experiment, ERCC spike-in profiles and gene-level estimates for a selected test set 16 samples shares experiment
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.