Expression data from human brain dorsolateral prefrontal cortex - including control samples and samples with major depression disorders (30 samples BA9_F)
Expression microarray · human · 30 samples
- What it is
- Expression microarrayGene activity read on a chip (the older technology that RNA-seq replaced).
- Organism
- Homo sapiens (human)
- Samples
- 30 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Read the full summary ↓
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE54568_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: For arrays the series matrix is normally the normalised expression table you want; the raw array files (CEL and similar) are in the RAW.tar.
Also filed as BioProject PRJNA237169. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 30 more — browse all 30 samples with per-sample file links →
- GSE54567 Expression data from human brain dorsolateral prefrontal cortex - including control samples and samples with major depression disorders (28 samples BA9_M) 28 samples shares ba9, dorsolateral, prefrontal, depression, including, disorders, control, cortex
- GSE54563 Expression data from human brain anterior cingulate cortex - including control samples and samples with major depression disorders (50 samples MD3_ACC) 50 samples shares depression, including, disorders, control, cortex
- GSE328351 Bulk RNA-seq of dorsolateral prefrontal cortex tissue collected during deep brain stimulation neurosurgery in obsessive-compulsive disorder and neurological controls 10 samples shares dorsolateral, prefrontal, control, cortex
- GSE332895 Control ChIP-seq from dorsolateral prefrontal cortex (ENCSR968XKG) 4 samples shares dorsolateral, prefrontal, control, cortex
- GSE332700 Control ChIP-seq from dorsolateral prefrontal cortex (ENCSR534KYQ) 2 samples shares dorsolateral, prefrontal, control, cortex
- GSE332658 Control ChIP-seq from dorsolateral prefrontal cortex (ENCSR295FXG) 2 samples shares dorsolateral, prefrontal, control, cortex
- GSE30272 Temporal Dynamics and Genetic Control of Transcription in the Human Prefrontal Cortex 269 samples shares prefrontal, control, cortex
- GSE174409 Transcriptional alterations in dorsolateral prefrontal cortex and nucleus accumbens implicate neuroinflammation and synaptic remodeling in opioid use disorder 80 samples shares dorsolateral, prefrontal, cortex
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.