Global peripheral blood gene expression study
Expression microarray · human · 350 samples
- What it is
- Expression microarrayGene activity read on a chip (the older technology that RNA-seq replaced).
- Organism
- Homo sapiens (human)
- Samples
- 350 samples: 350 samples, each with a distinct title — no replicated groupsGroups are read from the sample names, not from the paper. Check the list below.
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE47729_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: For arrays the series matrix is normally the normalised expression table you want; the raw array files (CEL and similar) are in the RAW.tar.
Also filed as BioProject PRJNA207499. Searching any of these in the dataset finder brings you back here.
Any grouping that defines a comparison lives in the sample characteristics, which GEO records separately from the titles.
How we read this: Read from 350 sample titles: 350 distinct titles with little repetition. These groups are guessed from the sample names, not taken from the paper, so check them against the sample list below before relying on them.
- GSM1298251 RNA_HVH_sample1 [HumanHT-12 V3.0]
- GSM1298252 RNA_HVH_sample2 [HumanHT-12 V3.0]
- GSM1298253 RNA_HVH_sample3 [HumanHT-12 V3.0]
- GSM1298254 RNA_HVH_sample4 [HumanHT-12 V3.0]
- GSM1298255 RNA_HVH_sample5 [HumanHT-12 V3.0]
- GSM1298256 RNA_HVH_sample6 [HumanHT-12 V3.0]
- GSM1298257 RNA_HVH_sample7 [HumanHT-12 V3.0]
- GSM1298258 RNA_HVH_sample8 [HumanHT-12 V3.0]
- GSM1298259 RNA_HVH_sample9 [HumanHT-12 V3.0]
- GSM1298260 RNA_HVH_sample10 [HumanHT-12 V3.0]
- GSM1298261 RNA_HVH_sample11 [HumanHT-12 V3.0]
- GSM1298262 RNA_HVH_sample12 [HumanHT-12 V3.0]
- GSM1298263 RNA_HVH_sample13 [HumanHT-12 V3.0]
- GSM1298264 RNA_HVH_sample14 [HumanHT-12 V3.0]
- GSM1298265 RNA_HVH_sample15 [HumanHT-12 V3.0]
- GSM1298266 RNA_HVH_sample16 [HumanHT-12 V3.0]
- GSM1298267 RNA_HVH_sample17 [HumanHT-12 V3.0]
- GSM1298268 RNA_HVH_sample18 [HumanHT-12 V3.0]
- GSM1298269 RNA_HVH_sample19 [HumanHT-12 V3.0]
- GSM1298270 RNA_HVH_sample20 [HumanHT-12 V3.0]
- GSM1298271 RNA_HVH_sample21 [HumanHT-12 V3.0]
- GSM1298272 RNA_HVH_sample22 [HumanHT-12 V3.0]
- GSM1298273 RNA_HVH_sample23 [HumanHT-12 V3.0]
- GSM1298274 RNA_HVH_sample24 [HumanHT-12 V3.0]
- GSM1298275 RNA_HVH_sample25 [HumanHT-12 V3.0]
- GSM1298276 RNA_HVH_sample26 [HumanHT-12 V3.0]
- GSM1298277 RNA_HVH_sample27 [HumanHT-12 V3.0]
- GSM1298278 RNA_HVH_sample28 [HumanHT-12 V3.0]
- GSM1298279 RNA_HVH_sample29 [HumanHT-12 V3.0]
- GSM1298280 RNA_HVH_sample30 [HumanHT-12 V3.0]
- GSM1298281 RNA_HVH_sample31 [HumanHT-12 V3.0]
- GSM1298282 RNA_HVH_sample32 [HumanHT-12 V3.0]
- GSM1298283 RNA_HVH_sample33 [HumanHT-12 V3.0]
- GSM1298284 RNA_HVH_sample34 [HumanHT-12 V3.0]
- GSM1298285 RNA_HVH_sample35 [HumanHT-12 V3.0]
- GSM1298286 RNA_HVH_sample36 [HumanHT-12 V3.0]
- GSM1298287 RNA_HVH_sample37 [HumanHT-12 V3.0]
- GSM1298288 RNA_HVH_sample38 [HumanHT-12 V3.0]
- GSM1298289 RNA_HVH_sample39 [HumanHT-12 V3.0]
- GSM1298290 RNA_HVH_sample40 [HumanHT-12 V3.0]
+ 310 more — browse all 350 samples with per-sample file links →
- GSE49126 Transcriptomic profiling of peripheral blood mononuclear cells from patients with Parkinson's disease and control subjects 50 samples shares peripheral, blood
- GSE310095 Whole Blood Transcriptomics Differentiates Circulating Gene Expression Between Coronary Artery Disease and Peripheral Artery Disease 71 samples shares peripheral, blood
- GSE288704 Whole transcriptome analysis of unmutated sporadic ALS patients’ peripheral blood reveals phenotype-specific gene expression signature 66 samples shares peripheral, blood
- GSE263995 Gene expression at single cell level of tumor-infiltrating cells from the tumor foci, draining lymph node and peripheral blood of triple-negative breast cancer 14 samples shares peripheral, blood
- GSE265753 Single cell gene expression profile of peripheral whole blood cells from long COVID patients 13 samples shares peripheral, blood
- GSE281106 Single-cell RNA-seq of peripheral blood links cell-type-specific regulation of splicing to autoimmune and inflammatory diseases [scRNAseq_KR_SGI] 352 samples shares peripheral, blood
- GSE255685 Age-related transcriptomic differences in peripheral blood of adolescents with major depressive disorder 279 samples shares peripheral, blood
- GSE326320 Integrative transcriptomic, network, and genomic analysis of peripheral blood mononuclear cells identifies candidate gene drivers of dupilumab clinical response in atopic dermatitis patients 36 samples shares peripheral, blood
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.