Dietary fat disturbance of of gut microbial diurnal patterns uncouples host metabolic networks.
Expression microarray · mouse · 8 samples
- What it is
- Expression microarrayGene activity read on a chip (the older technology that RNA-seq replaced).
- Organism
- Mus musculus (mouse)
- Samples
- 8 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Read the full summary ↓
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE53590_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: For arrays the series matrix is normally the normalised expression table you want; the raw array files (CEL and similar) are in the RAW.tar.
Also filed as BioProject PRJNA232463. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 8 more — browse all 8 samples with per-sample file links →
- GSE59644 Insights into microbial modulation of host peripheral lipid and glucose metabolism using mouse gut organoids 32 samples shares microbial, host
- GSE283608 Broccoli consumption alters microbial diversity, host and bacterial gene expression in mice fed a Total Western Diet 40 samples shares microbial, host
- GSE262319 GCN2 drives diurnal patterns in the hepatic integrated stress response and maintains circadian rhythms in whole body metabolism during amino acid insufficiency 24 samples shares patterns, diurnal
- GSE280358 Broccoli consumption alters microbial diversity, host and bacterial gene expression in mice fed a Total Western Diet [RNA-seq] 21 samples shares microbial, host
- GSE296696 Structure of gut microbial glycolipid modulates host inflammatory response 10 samples shares microbial, host
- GSE289267 Integrating microbial GWAS and single cell transcriptomics reveals associations between host cell populations and the gut microbiome 2 samples shares microbial, host
- GSE44322 Gene expression profile analysis of mouse whole spleen following infection by lymphocytic choriomeningitis virus (LCMV), comparing LCMV-Armstrong and LCMV-Clone 13 expression patterns at 0, 5, 9, and 30 days 26 samples shares patterns
- GSE6089 Expression patterns in liver after resveratrol treatment of mice on a high-calorie diet 14 samples shares patterns
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.