Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic Heterogeneity

Direct links to NCBI, no account and no request form: the whole study as GSE56879_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 56 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA244869 and SRA study SRP041257. Searching any of these in the dataset finder brings you back here.

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+ 56 more — browse all 56 samples with per-sample file links →

• GSE68642 Parallel single-cell bisulfite- and RNA-sequencing link transcriptional and epigenetic heterogeneity [Bisulfite-Seq] 96 samples
• GSE47815 Epigenetic and genetic changes during mouse hematopoietic stem cell aging [Bisulfite-Seq] 13 samples
• GSE236580 Adipose tissue retains an epigenetic memory of obesity after weight loss 135 samples
• GSE278990 Single-cell screens identify ADAM12 as a fibroblast checkpoint impeding anti-tumor immunity 73 samples
• GSE300288 Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [scRNA-seq] 31 samples
• GSE327176 Single-cell transcriptomic profiling unveils tumor-mediated reprogramming of neutrophils and their unique vulnerability that inhibits metastasis 25 samples
• GSE11034 Genome-scale DNA methylation maps of pluripotent and differentiated cells 18 samples
• GSE297921 Single-cell sequencing of CD45+ cells isolated from nasal mucosa of mice 18 samples

Search all mouse methylation datasets in GEO →