lncRNA and mRNA expression of cytokine treated MDA-MB-231 cells
Non-coding RNA profiling · human · 6 samples
- What it is
- Non-coding RNA profilingLevels of RNAs that do not code for proteins, such as miRNA or lncRNA.
- Organism
- Homo sapiens (human)
- Samples
- 6 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE57539_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
Also filed as BioProject PRJNA246655. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 6 more — browse all 6 samples with per-sample file links →
- GSE271120 TRAIL-induced cytokine production via NFKB2 pathway promotes neutrophil chemotaxis and immune suppression in triple negative breast cancers [MDA-MB-231] 17 samples shares mda-mb-231, cytokine
- GSE192636 mRNA, lncRNA and circular RNA expression profiles and ceRNA network construction of granulosa cells in ovarian endometriosis 10 samples shares lncrna, mrna
- GSE233402 mRNA and lncRNA expression profiling of human atherosclerotic plaques 13 samples shares lncrna, mrna
- GSE307635 bulk ATACseq of Ccd18-Co cell line treated with cytokines 44 samples shares cytokine, treated
- GSE288312 RNAseq analysis of cytokine-treated human neutrophils 29 samples shares cytokine, treated
- GSE307519 bulk RNAseq of Ccd18-Co cell line treated with cytokine mix and/or epigenetic modulator 16 samples shares cytokine, treated
- GSE267064 Effect of miR-662 and miR-24-2-5p overexpressions on gene expression in human MDA-MB-231-luc2-NW1 (NW1) and MCF7 cell lines. 15 samples shares mda-mb-231
- GSE297242 Effect of lactate accumulation on translation and transcription in MDA-MB-231 breast cancer cells 12 samples shares mda-mb-231
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.