Autophagy mediates the mitotic senescence transition
Expression microarray · human · 24 samples
- What it is
- Expression microarrayGene activity read on a chip (the older technology that RNA-seq replaced).
- Organism
- Homo sapiens (human)
- Samples
- 24 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE59522_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: For arrays the series matrix is normally the normalised expression table you want; the raw array files (CEL and similar) are in the RAW.tar.
Also filed as BioProject PRJNA255498. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 24 more — browse all 24 samples with per-sample file links →
- GSE146585 Functional genomics assays, including ChIP-seq, ATAC-seq, RNA-seq, GRO-seq, and in situ Hi-C, in the context of replicative senescence 223 samples shares senescence
- GSE311827 AP-1 Mediates Cellular Adaptation and Memory Formation [Bulk RNA-seq] 192 samples shares mediates
- GSE284666 SenCat: Redefining human cell senescence through multiomic profiling of multiple senescent cell types 190 samples shares senescence
- GSE269948 Defective RNA processing and ELOA-mediated transcriptional elongation in reversible cellular senescence suggest aging by transcription 162 samples shares senescence
- GSE263717 Epigenomic profiles of SLE resting and transitional B cells 150 samples shares transition
- GSE275078 In vitro drug screening of RAF/MEK/ERK Inhibitors in combination with Autophagy inhibition in the context of two PDA Cell Lines 136 samples shares autophagy
- GSE252902 Increased chromatin accessibility drives transition to androgen receptor splice variant dependence in castration-resistant prostate cancer 130 samples shares transition
- GSE262846 Transcriptomic Analysis of SLE Disease Activity in Resting Naive (rN) and Transitional (T1T2) B cells 88 samples shares transition
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.