Profiling of bacterial respiratory infection, viral respiratory infection, and non-infectious illness
Expression microarray · human · 280 samples
- What it is
- Expression microarrayGene activity read on a chip (the older technology that RNA-seq replaced).
- Organism
- Homo sapiens (human)
- Samples
- 280 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Read the full summary ↓
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE63990_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: For arrays the series matrix is normally the normalised expression table you want; the raw array files (CEL and similar) are in the RAW.tar.
Also filed as BioProject PRJNA269949. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 280 more — browse all 280 samples with per-sample file links →
- GSE272710 Macrophage-exacerbated viral lung injury and mechanical overdistension-driven bacterial superinfection replicated in a human lung chip 24 samples shares bacterial, viral
- GSE290693 Exploratory pilot study on transcriptome analysis in blood and urine for identifying potential miRNA biomarker candidates to dustinguish of bacterial vs. viral infections in children with fever (blood mRNA) 22 samples shares bacterial, viral
- GSE281938 Porphyromonas gingivalis inhibits Respiratory Syncytial Virus infection while suppressing anti-viral immunity 20 samples shares respiratory, viral
- GSE312997 Macrophage-exacerbated viral lung injury and mechanical overdistension-driven bacterial superinfection replicated in a human lung chip 14 samples shares bacterial, viral
- GSE322591 Macrophage-exacerbated viral lung injury and mechanical overdistension-driven bacterial superinfection replicated in a human lung chip 1 samples shares bacterial, viral
- GSE261482 A 5-transcript signature for discriminating viral and bacterial etiology in pediatric pneumonia 177 samples shares bacterial, viral
- GSE311749 Upper Airway Gene Expression in Hospitalized Children with Rhinovirus-induced Respiratory Illnesses 86 samples shares respiratory, illness
- GSE253542 Interferon signaling in the nasal epithelium distinguishes among lethal and common cold respiratory viruses and is critical for viral clearance 26 samples shares respiratory, viral
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.