Single Cell triple omics sequencing reveals genetic and epigenetic heterogeneity in hepatocellular carcinoma

Direct links to NCBI, no account and no request form: the whole study as GSE65364_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 95 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA273802 and SRA study SRP052901. Searching any of these in the dataset finder brings you back here.

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• GSE325427 Integrative single-nucleus multiomic, CUT&Tag, and bulk RNA-seq profiling of human and mouse prefrontal cortex reveals gene regulatory mechanisms of cortical development and Meis2 function 34 samples
• GSE328575 Single cell gene expression profiling of renal cell carcinoma 21 samples
• GSE282636 Multiplex generation and single cell analysis of structural variants in mammalian genomes 197 samples
• GSE287736 Sex-specific KDM6A-HNF4A-CREBH network controls lipoprotein cholesterol metabolism and atherosclerosis via epigenetic reprograming of hepatocytes 138 samples
• GSE241849 Absolute quantitative and base-resolution sequencing reveals comprehensive landscape of pseudouridine across the human transcriptome 54 samples
• GSE254753 Epigenetic memory of radiotherapy in dermal fibroblasts impairs wound repair capacity in cancer survivors (ATAC-Seq) 45 samples
• GSE240863 Single cell discovery of m6A RNA modifications in the hippocampus 43 samples

Search all RNA-seq datasets in GEO →