caArray_gray-00248: Genomic and transcriptional aberrations linked to breast cancer pathophysiologies
Expression microarray · human · 130 samples
- What it is
- Expression microarrayGene activity read on a chip (the older technology that RNA-seq replaced).
- Organism
- Homo sapiens (human)
- Samples
- 130 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE69031_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: For arrays the series matrix is normally the normalised expression table you want; the raw array files (CEL and similar) are in the RAW.tar.
Also filed as BioProject PRJNA284339. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 130 more — browse all 130 samples with per-sample file links →
- GSE69035 caArray_gray-00298: Genomic and transcriptional aberrations linked to breast cancer pathophysiologies - Genome Copy Number (Scanning and OncoBAC) 290 samples shares pathophysiologies, aberrations, caarray, linked, breast
- GSE69017 caArray_gray-00215: A collection of breast cancer cell lines for the study of functionally distinct cancer subtypes 51 samples shares caarray, breast
- GSE68586 caArray_brown-00173: Molecular portraits of human breast tumours 84 samples shares caarray, breast
- GSE232381 RNA-seq of Peripheral Blood Cells Identifies Molecular Network Linked to Lymphocyte Subset Aberrations and Active Lupus Nephritis in SLE 25 samples shares aberrations, linked
- GSE68928 caArray_golub-00236: Multiclass cancer diagnosis using tumor gene expression signatures 539 samples shares caarray
- GSE68555 caArray_becic-00235: Gene expression alterations in prostate cancer predicting tumor aggression and preceding development of malignancy 444 samples shares caarray
- GSE68907 caArray_golub-00142: Gene expression correlates of clinical prostate cancer behavior 102 samples shares caarray
- GSE68465 caArray_jacob-00182: Gene expression-based survival prediction in lung adenocarcinoma: a multi-site, blinded validation study 462 samples shares caarray
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.