Genome-wide expression analysis of quiescent versus activated muscle stem cells (satellite cells)
Expression microarray · mouse · 8 samples
- What it is
- Expression microarrayGene activity read on a chip (the older technology that RNA-seq replaced).
- Organism
- Mus musculus (mouse)
- Samples
- 8 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE70376_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: For arrays the series matrix is normally the normalised expression table you want; the raw array files (CEL and similar) are in the RAW.tar.
Also filed as BioProject PRJNA288469. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 8 more — browse all 8 samples with per-sample file links →
- GSE339586 Extensive Crosstalk between BMP and Notch Signaling Pathways in Activated Adult Muscle Stem Cells [RNA-seq III] 24 samples shares activated, muscle, stem
- GSE305745 Extensive Crosstalk between BMP and Notch Signaling Pathways in Activated Adult Muscle Stem Cells [CUT&Tag] 14 samples shares activated, muscle, stem
- GSE262348 NEMO Knockout Drives Variations in Gene Expression Regenerative Trajectory and Induces Chromatin Remodeling in murine muscle satellite cells during healing from traumatic injury 20 samples shares satellite, muscle
- GSE272898 Cell types activated in mouse muscle by TLR7/8 stimulation 23 samples shares activated, muscle
- GSE288012 Genome-wide screen identifies Runx2 as a novel regulator of hematopoietic stem cell expansion and T-cell commitment 20 samples shares genome-wide, stem
- GSE279409 mRNA profiles of activated hematopoietic stem cells under several conditions [RNA-Seq] 20 samples shares activated, stem
- GSE279407 Chromatin accessibility profiles of activated hematopoietic stem cells under several conditions [ATAC-Seq] 17 samples shares activated, stem
- GSE263404 Genome-wide identification of endogenous NMD-targeted RNAs in human stem cells [Upf3b_mice] 16 samples shares genome-wide, stem
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.