Hair follicle aging is driven by transepidermal stem cell elimination via COL17A1 proteolysis
Expression microarray · mouse · 12 samples
- What it is
- Expression microarrayGene activity read on a chip (the older technology that RNA-seq replaced).
- Organism
- Mus musculus (mouse)
- Samples
- 12 samples: 12 samples, each with a distinct title — no replicated groupsGroups are read from the sample names, not from the paper. Check the list below.
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Read the full summary ↓
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE72863_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: For arrays the series matrix is normally the normalised expression table you want; the raw array files (CEL and similar) are in the RAW.tar.
Also filed as BioProject PRJNA295214. Searching any of these in the dataset finder brings you back here.
Any grouping that defines a comparison lives in the sample characteristics, which GEO records separately from the titles.
How we read this: Read from 12 sample titles: 12 distinct titles with little repetition. These groups are guessed from the sample names, not taken from the paper, so check them against the sample list below before relying on them.
- GSM1873557 yHFSCs1
- GSM1873558 yHFSCs-pk1
- GSM1873559 yTotal-Epi1
- GSM1873560 yIFE1
- GSM1873561 oHFSCs1
- GSM1873562 oHFSCs-pk1
- GSM1873563 oTotal-Epi1
- GSM1873564 oIFE1
- GSM1873565 ctrl1
- GSM1873566 ctrl-pk1
- GSM1873567 cKO1
- GSM1873568 cKO-pk1
- GSE231332 Senescent cell elimination modifies features of Alzheimer’s disease in 3xTg-AD mice 28 samples shares elimination
- GSE311013 Elimination of myotonia improves myopathy in a muscleblind knockout model of myotonic dystrophy: longread sequencing of Clcn1 transcripts in muscle from Mbnl1 knockout, Exon 7a deletion, and ADR mice. 27 samples shares elimination
- GSE311069 Elimination of myotonia improves myopathy in a muscleblind knockout model of myotonic dystrophy: Deep RNAseq of quadriceps muscle to assess myotonia dependent changes in transcript expression and splicing. 16 samples shares elimination
- GSE235601 Preventing Site-specific Calpain Proteolysis of Junctophilin-2 Protects Against Stress-induced E-C Uncoupling and Heart Failure 16 samples shares proteolysis
- GSE234641 Effects of selective elimination of senescent cells on RPE/choroid complex in mice with subretinal drusenoid deposits 15 samples shares elimination
- GSE215242 Elimination of dormant cancer stem cells by disrupting glucocorticoid mediated lipid metabolism in glioblastoma [treatment] 13 samples shares elimination
- GSE301446 Elimination of senescent cells with senolytic host-directed therapy reduces tuberculosis progression in mice. 12 samples shares elimination
- GSE255283 Oncogenic Kras cells override homeostatic cell elimination mechanisms in adult pancreas via Wnt signalling and cell dormancy. 12 samples shares elimination
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.