Single cell RNA sequencing of primary breast cancer.

Direct links to NCBI, no account and no request form: the whole study as GSE75688_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 563 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA305054 and SRA study SRP066982. Searching any of these in the dataset finder brings you back here.

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• GSE328275 Single-cell RNA sequencing of CD45+ immune cells across primary tumor, sentinel tumor-draining lymph node, and axillary lymph node in treatment-naive triple-negative breast cancer 28 samples
• GSE294300 Single-cell gene expression profiles of cells from primary colorectal cancer and adjacent normal tissue [scRNA-Seq] 36 samples
• GSE303346 Single-Cell RNA-Seq Reveals Immunosuppressive Effects of Triple-Negative Breast Cancer–Derived Exosomes on NK Cell Responses 16 samples
• GSE319641 RNA-Seq profiling of pre- and on-treatment tumor samples from breast cancer patients enrolled in the NeoTRIP trial. 401 samples
• GSE243013 A single-cell atlas of immune heterogeneity in anti-PD1-treated non-small cell lung cancer 243 samples
• GSE323973 Expression profiling by high throughput sequencing of breast cancer 158 samples
• GSE324131 A single-cell and spatial atlas of prostate cancer reveals the combinatorial nature of gene modules underlying lineage plasticity and metastasis 38 samples
• GSE269877 Single-cell RNA-sequencing of BCG naïve and recurrent non-muscle invasive bladder cancer reveals a CD6/ALCAM-mediated immune-suppressive pathway 38 samples

Search all human RNA-seq datasets in GEO →