ChIP-exo of human KRAB-ZNFs transduced in HEK 293T cells and KAP1 in hES H1 cells

Direct links to NCBI, no account and no request form: the whole study as GSE78099_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 237 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA312613 and SRA study SRP070561. Searching any of these in the dataset finder brings you back here.

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+ 237 more — browse all 237 samples with per-sample file links →

• GSE215328 Pivotal Role of the NuRD Complex in Remodeling Chromatin Environment and Maintaining Genome Architecture at CTCF Sites [hESC_H9_d049_ChIP_Seq] 135 samples
• GSE284519 TRIM33 loss reduces Androgen Receptor transcriptional output and H2BK120 ubiquitination [ChIP-seq] 93 samples
• GSE296190 Hypoxic regulation of chromatin and gene transcription [ChIP-seq] 84 samples
• GSE294235 Rheumatoid Arthritis circulating CD14+ monocytes are epigenetically primed [ChIP-seq] 75 samples
• GSE335058 Evolutionary guided transcription factor design programs novel T cell states [ChIP-Seq] 66 samples
• GSE293334 Allelic topological centering by transcription factors drives oncogenic multi-enhancer transcriptional regulation [ChIP-seq] 60 samples
• GSE296831 Epigenetic Context Defines the Transcriptional Activity of Canonical and Noncanonical NF-kappaB Signaling in Pancreatic Cancer [ChIP-Seq] 48 samples
• GSE259248 ZBTB7A is a modulator of KDM5-driven transcriptional networks in basal breast cancer (ChIP-Seq) 36 samples

Search all human ChIP / ATAC / CUT&Tag datasets in GEO →