Bovine cumulus cells transcriptome in relation with oocyte chromatin configuration of the germinal vesicle
Expression microarray · Bos taurus · 12 samples
- What it is
- Expression microarrayGene activity read on a chip (the older technology that RNA-seq replaced).
- Organism
- Bos taurus
- Samples
- 12 samples
- Data you can get
- A processed expression table (series matrix) and the array files, from NCBI.
Direct links to NCBI, no account and no request form. Pick by what you want to do: take the small processed table to look, the supplementary files to re-analyse, or the original raw data to start over.
Processed table
The series matrix: one table of values per sample as the submitters processed it. The smallest download, and it opens in Excel or R. Start here to see what the data look like.
Supplementary files
The count tables and other files the authors uploaded. Take only the samples you need.
Whole study · RAW.tar
Everything the authors deposited as one archive (GSE79886_RAW.tar), including the raw array or instrument files. Can be large; the picker in step 2 takes just the samples you need.
What the files usually look like: For arrays the series matrix is normally the normalised expression table you want; the raw array files (CEL and similar) are in the RAW.tar.
Also filed as BioProject PRJNA317323. Searching any of these in the dataset finder brings you back here.
The sample list for this study is not cached yet. Press Load samples and it will be fetched from NCBI.
+ 12 more — browse all 12 samples with per-sample file links →
No close match found for this topic, so these are simply the most-viewed datasets of the same kind.
- GSE249434 Single-cell profiling reveals transcriptome dynamics during bovine oocyte growth 179 samples
- GSE176344 Next Generation Sequencing of Oocyte and Associated Cumulus Cells Pools from Preovualtory Follicles in Bovine 33 samples
- GSE36605 Transcriptional profiling of cumulus cells differentiation throughout oocyte competence acquisition in the bovine ovarian follicles. 17 samples
- GSE31261 Transcriptional profiling of cumulus cells entoured the oocyte after in vitro or in vivo maturation in bovine (Bos taurus) 8 samples
- GSE67969 Transcriptome analysis of bovine cumulus cells during first 6 hrs of in vitro maturation 6 samples
- GSE67970 Transcriptome analysis of FSH response in bovine cumulus cells 6 samples
- GSE330668 A transcriptomic map of ligand-receptor interactions within bovine antral follicles reveals commonality and redundant strategies for intercellular communications and predicts intrafollicular factors for improving oocyte quality 90 samples
- GSE99678 Functional signaling and gene regulatory networks between the oocyte and the surrounding cumulus cells 48 samples
Metadata from NCBI GEO, cached and refreshed periodically — the NCBI page above is authoritative. Downloads link straight to NCBI/ENA; nothing is proxied through BioTransfer.