Epigenome maps of time-resolved monocyte to macrophage differentiation and innate immune memory (ChIP-Seq)

Direct links to NCBI, no account and no request form: the whole study as GSE85245_RAW.tar, processed values as the series matrix, the supplementary file directory, and per-sample supplementary files for any of the 132 samples. Raw sequencing reads are also available from ENA.

Also filed as BioProject PRJNA343285 and SRA study SRP093528. Searching any of these in the dataset finder brings you back here.

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+ 132 more — browse all 132 samples with per-sample file links →

• GSE339049 Severe long-COVID is driven by monocyte reprogramming and broad immune dysregulation linked to herpesvirus activation 48 samples
• GSE142751 Genome-wide maps of chromatin state in 142 cancer cell lines [cell line] 855 samples
• GSE319092 Integrated Multi-Omics and Interactome Analysis of CDK8 Inhibition Reveals Erythroid Differentiation Programs and BET Synergy in AML Stem-like Cells 135 samples
• GSE215328 Pivotal Role of the NuRD Complex in Remodeling Chromatin Environment and Maintaining Genome Architecture at CTCF Sites [hESC_H9_d049_ChIP_Seq] 135 samples
• GSE339365 Genome-wide H3K4me3 profiling of circulating immune cells reveals dynamic epigenetic reprogramming during acute critical COVID-19 120 samples
• GSE284519 TRIM33 loss reduces Androgen Receptor transcriptional output and H2BK120 ubiquitination [ChIP-seq] 93 samples
• GSE296190 Hypoxic regulation of chromatin and gene transcription [ChIP-seq] 84 samples
• GSE294235 Rheumatoid Arthritis circulating CD14+ monocytes are epigenetically primed [ChIP-seq] 75 samples

Search all human ChIP / ATAC / CUT&Tag datasets in GEO →